Streptomyces prasinus: CP972_07260
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Entry
CP972_07260 CDS
T07676
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
spra
Streptomyces prasinus
Brite
KEGG Orthology (KO) [BR:
spra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spra03019
]
CP972_07260
Enzymes [BR:
spra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CP972_07260
Messenger RNA biogenesis [BR:
spra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CP972_07260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
MTR4-like_stalk
AAA_22
ENT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QEV05511
UniProt:
A0A5J6GUJ8
LinkDB
All DBs
Position
complement(1571173..1574028)
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AA seq
951 aa
AA seq
DB search
MIVLLSVRPGTLESTMTEDLSPAERYAAARRRAAEQATALASFREMYDFGLDPFQIEACQ
ALEAGKGVLVAAPTGSGKTIVGEFAVHLALQQGKKCFYTTPIKALSNQKYADLCRRYGSD
KVGLLTGDNSVNSGAPVVVMTTEVLRNMLYAGSQTLLGLGYVVMDEVHYLSDRFRGAVWE
EVIIHLPESVTLVSLSATVSNAEEFGDWLDTVRGHTEVIVSEHRPVPLFQHVLAGRRIYD
LFEEGEGRKKAVNPDLTRMARMEATRPSWGDRRRGRNMREADRERERRQRTRVWTPGRPE
VIERLDAQGLLPAITFIFSRAACEAAVQQCLYAGLRLNDDRAREEVRALVEERTAAIPTE
DLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPAR
SVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVVLWQRGMNPEHLAGLAGT
RTYPLRSSFRPSYNMAVNLVEQFGRHRSRELLETSFAQFQADRSVVGISRQVQRNEEGLE
GYQASMTCHLGDFEEYAKLRRDLKDRETELARQGVAQRRAEAAVALEKLRPGDIIHVPAG
KYAGLALVLDPGLPAGRAGGHHGVEYHDGPRPLVLTAERQVKRLASIDFPMPVEALERMK
IPKSFNARSPQSRRDLASALRTKAGHIEPERHRKRRSQAADDREIDRLRKAIRAHPCHGC
DDREDHARWAERYHRLRRDTKQLERRIEGRTNTIARTFDRIVALLTELDYLRGDEVTAHG
KRLARLYGELDLLASECLREGVWEQLNPAELAACVSALVYEARVSDDAAVPKVPSGGAKA
ALGEMVRIWGRLDALEEDFRITQTEGVGQREPDLGFAWAAYMWASGKGLDEVLREVEMPA
GDFVRWCKQVIDVLGQIAAAAPAREDSTVAKNARKAVDALLRGVVAYSSVG
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcctgttgtcggtgcggcccggtacgctcgaaagcacgatgacagaggatctc
tcaccggccgagcggtacgcggcagcacgcaggcgcgctgccgagcaggccaccgcactc
gcctccttccgcgagatgtacgacttcggcctcgaccccttccagatcgaggcgtgccag
gcgctcgaagcggggaagggtgtgctggtggccgcgcccaccggctcgggcaagacgatc
gtcggcgagttcgccgtccacctggccctccagcagggcaagaagtgcttctacacgacg
cccatcaaggcgctgtcgaaccagaagtacgccgacctgtgccgccgctacggcagcgac
aaggtcggcctgctcaccggtgacaacagcgtcaactccggtgcccccgtggtcgtgatg
accaccgaggtgctgcggaacatgctgtacgcgggctcgcagacgctgctcggcctcggc
tacgtggtcatggacgaggtgcactacctctccgaccgcttccggggcgccgtctgggag
gaagtgatcatccacctccccgagtcggtgaccctggtgtccctctcggcgacggtctcg
aacgcggaggagttcggcgactggctggacaccgtccgcggccacaccgaggtcatcgtc
tccgagcaccggccggtgccgctgttccagcacgtcctcgccggacgccggatctacgac
ctgttcgaggagggcgagggccggaagaaggccgtcaaccccgacctcacgcggatggcc
cggatggaggcgacccgcccctcgtggggcgaccggcgccgcggccggaacatgcgggag
gcggaccgggagcgggagcgcagacagcgcacacgggtctggacaccgggccggcccgag
gtgatcgagcggctcgacgcccagggcctgctgcccgccatcaccttcatcttcagccgc
gccgcctgcgaggcggccgtccagcagtgcctgtacgcggggctgcggctcaacgacgac
cgggcgcgggaggaggtccgcgccctcgtcgaggagcgcaccgccgccatccccaccgag
gacctgcacgtcctcggctactacgagtggctggagggcctggagcgcggcatcgcggcc
caccacgcgggcatgctgccgacgttcaaggaggtcgtcgaggagctgttcgtccgcggc
ctggtcaaggcggtcttcgcgaccgagaccctcgctctgggcatcaacatgcccgcccgc
tcggtggtgctggagaagctcgtcaagtggaacggcgagcagcacgccgacatcacccca
ggcgagtacacccagctgaccggccgggccggccggcgcggcatcgacgtcgagggccac
gcggtcgtgctgtggcagcgcggcatgaaccccgagcacctcgcggggctggccggcacc
cgcacctatccgctgcgctccagtttcaggccgtcgtacaacatggcggtcaacctggtc
gagcagttcggccggcaccgctcgcgcgagctgctggagacgtcgttcgcccagttccag
gcggaccgttcggtggtcggcatctcacggcaggtgcagcgcaacgaggagggcctcgag
ggctaccaggcctccatgacctgccacctcggcgacttcgaggagtacgcgaagctgcgc
cgcgacctgaaggaccgggagacggagctggcccgccagggtgtggcgcagcggcgcgcc
gaggcggccgtcgccctggagaagctcaggcccggcgacatcatccacgtacccgccggc
aagtacgccgggctggccctggtcctcgacccggggctgcccgcgggccgtgcgggcgga
caccacggcgtcgagtaccacgacgggccgcgccccctggtgctgaccgcggagcggcag
gtcaagcggctggcgtcgatcgacttcccgatgcccgtcgaggcactggagcggatgaag
atcccgaagtcgttcaacgcgcgctcgccgcagtcccgccgcgacctggcctccgcactg
cgcaccaaggccgggcacatcgagccggagcggcaccgcaagcggcgctcccaggcggcc
gacgaccgggagatcgaccggctgcgcaaggcgatccgggcccacccgtgccacggctgc
gacgaccgtgaggaccacgcccgctgggccgagcgctaccaccggctgcggcgggacacc
aagcagctggagcggcgcatcgaaggccggacgaacaccatcgcccgcaccttcgaccgc
atcgtcgccctgctgaccgagctggactacctgcgcggcgacgaggtcaccgcacacggc
aagcggctcgcccggctgtacggcgaactcgacctgctcgccagcgaatgcctgcgcgag
ggcgtctgggagcagctgaacccggccgaactcgccgcctgcgtctcggccctggtgtac
gaggcccgggtcagcgacgacgcggcggtgcccaaggtgccctccggcggggcgaaggcc
gcgctcggcgagatggtccgcatctgggggcggctggacgctctggaggaggacttccgc
atcacccagaccgagggcgtgggccagcgcgaacccgacctcggtttcgcctgggcggcc
tacatgtgggcgtccggcaagggcctcgacgaggtgctgcgcgaggtggagatgccggcg
ggggacttcgtgcgctggtgcaagcaggtcatcgacgtgctcggccagatcgcggccgcg
gcaccggcgagggaggactccaccgtcgcgaagaacgcccgcaaggcggtggacgcactg
ctgcgcggagtggtggcctactcctccgtgggctga
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