Streptomyces prasinus: CP972_16910
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Entry
CP972_16910 CDS
T07676
Name
(GenBank) pectate lyase
KO
K01051
pectinesterase [EC:
3.1.1.11
]
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
spra
Streptomyces prasinus
Pathway
spra00040
Pentose and glucuronate interconversions
spra01100
Metabolic pathways
spra02020
Two-component system
spra02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CP972_16910
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CP972_16910
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CP972_16910
Enzymes [BR:
spra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
CP972_16910
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CP972_16910
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
Pectate_lyase_4
Beta_helix
DUF5508
Motif
Other DBs
NCBI-ProteinID:
QEV07100
UniProt:
A0A5J6H6F1
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All DBs
Position
3713483..3715651
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AA seq
722 aa
AA seq
DB search
MSEHPRTVRHRGGTGARAVALPLVLATAAATLAYGAAPGTAAPAPVVAAPVAAAAAPAWA
TATADGFASVDALGQNGTYGGRDGAIVTVRTQAELERYATAAEPYVIVVAGTITMNPVGK
EIKVASDKTIVGSGTSGHIVGGGFFLGQGVHNVIIRNLTIRDAYQGVWNDKDHDFDAVQM
DGAHHVWIDHNDLRNMADGLIDVRKDSTYVTVSWNRMSHNNKAFGIGWTENVLTDITIHH
NWIRETEQRNPSTDNCAHAHLYNNFLEDTPGTDITSSYGNYARGGTRMVLENSYFQGFRN
PVTKDATASLVQRGSVFSGTSGRNESGGTAFDPRTYYAYTLDRAADVPALLKSGAGPRGS
LGTTTASGTATGTATSGTIASGAATGTAVPVTGATTAALPAAAATTLTVAKDGTGQYRTV
QAAVDAVPANNPSRVLISVKPGTYRETVKVPSNKPHVTVQGTGGSRKNTVIVFNNAAGTP
KPDGSGTYGTSGSATFTVQADDFQARNLTISNDFDERANQSLAGHQAVALRTAADKVLLD
GVIVEGDQDTLLLDTAAKERLGRVKVTNSYVVGNVDFIFGRATALIDRSVITLKKRWDGS
SGGYVTAPSTAAGRNGILIADSAVNGDVSDRTFHLGRPWHAGGDASLDPQTTVRDTYLSA
AVRTTPWTDMSGFSWKDDRFAEYRNTGPGAGSASSDRPHLTDARATAQAVDTWLGDWTPT
AS
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcaccctcgcacagtccggcaccgcggcggcaccggggcacgggcggtcgcc
ctccccctggtactggccaccgcggccgccaccctggcctacggagccgcaccgggcacg
gccgcccccgcccccgtggtggccgcccccgtcgcggctgccgccgcccccgcctgggcc
accgccaccgccgacggcttcgcctccgtcgacgcgctgggccagaacggcacgtacggc
ggccgggacggtgcgatcgtcaccgtccggacccaggccgaactggagcggtacgcgacc
gccgccgagccgtacgtgatcgtcgtggccgggaccatcacgatgaacccggtcggcaag
gagatcaaggtcgcctccgacaagacgatcgtgggctcgggaacgtccgggcacatcgtc
ggcggcggcttcttcctcggccagggcgtccacaacgtgatcatccgcaacctgacgatc
cgggacgcctaccagggcgtctggaacgacaaggaccacgacttcgacgcggtgcagatg
gacggcgcgcaccacgtctggatcgaccacaacgacctgcggaacatggcggacggcctg
atcgacgtccgcaaggacagcacgtacgtgacggtctcctggaacaggatgagccacaac
aacaaggcgttcggcatcggctggaccgagaacgtgctgaccgacatcacgatccaccac
aactggatccgcgagacggagcagcgcaacccgtccacggacaactgcgcgcacgcacac
ctctacaacaacttcctcgaggacacccccggcacggacatcacctcctcctacggcaac
tacgcgcgcggcggcacccgcatggtgctggagaacagctacttccagggcttcaggaac
ccggtcaccaaggacgcgacggcgtccctggtgcagcgcggcagcgtcttctcgggcacg
tcgggccgcaacgagagcggcggcacggcgttcgacccgaggacgtactacgcctacacc
ctcgaccgggcggcggacgtgccggccctcctcaagtcgggcgcgggtccgcgcggctcc
ctcggcacgaccaccgcatccggaaccgccaccgggaccgccacttccggaaccatcgct
tccggggccgccaccgggaccgccgtcccggtcaccggtgccacgaccgccgccctcccg
gccgccgccgcgacgacgctcaccgtagccaaggacggcaccggccagtaccgcacggtc
caggccgcggtggacgccgtccccgccaacaacccgtcccgcgtgctgatctccgtcaag
ccgggcacgtaccgggagacggtcaaggtcccctcgaacaagccgcacgtcacggtgcag
ggcaccggcggcagccgcaagaacacggtgatcgtcttcaacaacgcggcgggcaccccg
aaaccggacggttcggggacctacggcacctcgggcagcgcgacgttcaccgtgcaggcc
gacgacttccaggcccgcaacctgacgatctccaacgacttcgacgagcgggccaaccag
tccctcgccggtcaccaggccgtggccctgcgcaccgccgccgacaaggtcctcctggac
ggcgtcatcgtcgagggcgaccaggacaccctgctcctcgacaccgccgccaaggaacgc
ctcggcagggtgaaggtcaccaactcctacgtggtcggcaacgtcgacttcatcttcggc
cgggcgacggcgctgatcgaccggtccgtcatcacactgaagaagcgctgggacggcagt
tccgggggctacgtcaccgccccgagcacggccgccggccgcaacggcatcctgatcgcc
gactccgcggtgaacggcgacgtctccgaccgcaccttccacctcggccgcccctggcac
gccggcggcgacgcctccctggacccgcagaccacggtccgcgacacctacctcagcgcc
gcggtccgcaccacgccctggaccgacatgagcggcttctcctggaaggacgaccgcttc
gccgaataccgcaacaccggccccggcgcgggctccgcctcctccgaccgcccccacctg
accgacgcccgggcgacggcccaggccgtcgacacctggctcggcgactggacccccacg
gcgtcctga
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