Sphingobacterium psychroaquaticum: E2P86_05595
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Entry
E2P86_05595 CDS
T05967
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
spsc
Sphingobacterium psychroaquaticum
Pathway
spsc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
spsc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E2P86_05595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spsc03021
]
E2P86_05595
Transcription machinery [BR:
spsc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E2P86_05595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
HTH_24
Sigma70_ECF
HTH_30
HTH_23
HTH_Tnp_ISL3
HTH_17
HTH_10
HTH_16
HTH_5
MarR_2
HTH_AsnC-type
Nterm_IS4
BIG2_C
HTH_1
CENP-B_N
TetR
HTH_11
HTH_28
MerR
HTH_20
HTH_DeoR
Sigma70_r3
DUF1492
Motif
Other DBs
NCBI-ProteinID:
QBQ40653
UniProt:
A0A7Z1WYP4
LinkDB
All DBs
Position
1350849..1351418
Genome browser
AA seq
189 aa
AA seq
DB search
MLLELNVTDIELVRLLRNGDHDALERIYKRYHHVLYSHAYRRLPDREEVRDILHEIFISL
WQNRDTFFITSSLSAYLYAAVRSRVLNVVRNQKVRDSYAQSLQAFMDEGVEVTETKFREK
ELIRLVEQEVRALPTQMRIIFEMSRFQERSHKEVAEELNISPQTVRTQVRNALRILRVKL
GDNIFTLFF
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atacttttggaacttaatgtaacggatatagaacttgtgagactattgaggaatggtgac
cacgatgctttggagcgtatctataagcggtatcaccacgtcctttatagccatgcctac
cgtagactgccggatcgggaagaggtgcgggatatcttgcatgaaatattcattagtctt
tggcaaaatagagatacctttttcatcacttcgagtctctctgcctatctctacgctgcg
gtgcgaagtagggtgctcaatgtggtccgtaaccaaaaggtacgggacagctatgcccaa
tccctacaggcttttatggatgagggagtggaagtcacagaaacaaagtttcgggaaaag
gaattgattcgcctggtagagcaggaggtacgtgcactaccgacacagatgcgtattatt
tttgagatgagtaggtttcaggaacgctcacacaaagaggttgccgaggaactcaatatc
agcccgcagactgttcgcacgcaagttcggaatgcactccgcatactccgcgtaaaatta
ggagacaatatattcaccttgtttttctaa
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