KEGG   Sphingobacterium psychroaquaticum: E2P86_05595
Entry
E2P86_05595       CDS       T05967                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
spsc  Sphingobacterium psychroaquaticum
Pathway
spsc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:spsc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    E2P86_05595
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spsc03021]
    E2P86_05595
Transcription machinery [BR:spsc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     E2P86_05595
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 GerE HTH_24 Sigma70_ECF HTH_30 HTH_23 HTH_Tnp_ISL3 HTH_17 HTH_10 HTH_16 HTH_5 MarR_2 HTH_AsnC-type Nterm_IS4 BIG2_C HTH_1 CENP-B_N TetR HTH_11 HTH_28 MerR HTH_20 HTH_DeoR Sigma70_r3 DUF1492
Other DBs
NCBI-ProteinID: QBQ40653
UniProt: A0A7Z1WYP4
LinkDB
Position
1350849..1351418
AA seq 189 aa
MLLELNVTDIELVRLLRNGDHDALERIYKRYHHVLYSHAYRRLPDREEVRDILHEIFISL
WQNRDTFFITSSLSAYLYAAVRSRVLNVVRNQKVRDSYAQSLQAFMDEGVEVTETKFREK
ELIRLVEQEVRALPTQMRIIFEMSRFQERSHKEVAEELNISPQTVRTQVRNALRILRVKL
GDNIFTLFF
NT seq 570 nt   +upstreamnt  +downstreamnt
atacttttggaacttaatgtaacggatatagaacttgtgagactattgaggaatggtgac
cacgatgctttggagcgtatctataagcggtatcaccacgtcctttatagccatgcctac
cgtagactgccggatcgggaagaggtgcgggatatcttgcatgaaatattcattagtctt
tggcaaaatagagatacctttttcatcacttcgagtctctctgcctatctctacgctgcg
gtgcgaagtagggtgctcaatgtggtccgtaaccaaaaggtacgggacagctatgcccaa
tccctacaggcttttatggatgagggagtggaagtcacagaaacaaagtttcgggaaaag
gaattgattcgcctggtagagcaggaggtacgtgcactaccgacacagatgcgtattatt
tttgagatgagtaggtttcaggaacgctcacacaaagaggttgccgaggaactcaatatc
agcccgcagactgttcgcacgcaagttcggaatgcactccgcatactccgcgtaaaatta
ggagacaatatattcaccttgtttttctaa

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