Staphylococcus shinii: JMB28_09430
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Entry
JMB28_09430 CDS
T08256
Name
(GenBank) SH3-like domain-containing protein
KO
K13714
bifunctional autolysin [EC:
3.5.1.28
3.2.1.96
]
Organism
spsd
Staphylococcus shinii
Pathway
spsd00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
spsd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
JMB28_09430
Enzymes [BR:
spsd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
JMB28_09430
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
JMB28_09430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GW
Glucosaminidase
Motif
Other DBs
NCBI-ProteinID:
QRA15866
LinkDB
All DBs
Position
1988777..1993588
Genome browser
AA seq
1603 aa
AA seq
DB search
MAKKKNTYKVPSIIALTLAGTALTTHHAQAADKTQDQSTNKNILNDDKALNQSEQIKSEI
SKPTANISGTQVYKDPTQIKQASTDNNLNYDAQIDELNNQTSDQMTTQNTYNQNGQDQEA
QQKDDSTVKTNQENVENEITSDEATNNVNTSDNVEKQATEAVQEDDIVSDKGNVTSDNKQ
DVAKDSDKSDAASSEQGNNAVQNDSVVTDKDNVTSDDSQDVTKDSDKSDAASSEQDTEAL
QQDDSTSDKDDVTSDDSQDVAKDSDKSDAASTKQDSNTVQKDGIASDKDDVTSDDSQDVA
KNSDKSDAASSEQDTEALQQDDSTSDKDDVTSDDSQDVTKDSDKSDAASTKQDSNTVQKD
DSTSDKDDVTSDDSQDVAKDSDKSDAASNEQDSNAVQQDDSTSDKDEVTSDDSQDVAKDS
DKSDDASNEQDSNTVQKDDSTSDKNDVTSDDSQDAAKDSDKSDAASNEQDSNAVQQDDST
SDKDDVTSDDSQDVAKDSDKSNAASSEQDTEALQQDDSTSDKDDVTSDDSQDVTKDSDKS
DAASTKQDSNTVQKDDSTSDKDDVTSDDSQDVAKDSDKSDAASTKQDSNTVQKDGAETTK
AVNTTFYSAQAAPKLRVARSADSTVATRSALTKETTTRSTLPKYSPKVSSSINNYIRKNN
FKAPNYEQDIASYLPKYNYRYGKPEGIVMHDTANDNSTITGEINFMKNNYQNAFVHAYVD
GNRIIETANTDYLAWGGGAAANERFIHVELVHTHDYDSFARSINNYADYAATNLQYYGLV
PDSAEYDGVGTVWTHQAVSTFLGGTDHTDPHGYLAAHNYSYNELYDLIYEKYLIKTGQAA
AWGTPSSGSTSGTGSNNTGSSNTGTTAPTKTGTVKVTANNGVGRINTTNDGLYTTVYDQN
GKKTDRTNQTLKVTKSATLGNENFYLVSDFNKGTLIGWVHQGDVNYNTAKAATSINKAYK
IKPGETLYTVPWGTSSQKAGTVSGKSTQTFKATKQQQIGKTNYVYGTVNNLSGWVSLSKL
SSTSNTATSPTTNSGKLTVSTLTNQQGTVAKNNHGVYTTVYDKQGVQKSYVNGKTYKLSK
KATLGNNAFYLITDNKTNTNIGWMQTGDIKVKEAATKATSNQTQNISKIGQLNTKNSGIK
ATVYDQQGKDATKLAGKTYNVTKQRTEGNKTYVLIQNVNQNTPIGWINTKDINTRNLSQA
SAKNGQYTVKATNNGLYAVPWGTKSQQLDTLNNLKNNQFNASKSVYVDKDEYVYGIVNNK
TGWIAANDLNKLQSANNTNASNSQNITKSAVTPYKYDYVIFNKNGSYYLDPTSTTAAGSL
KDFYESIFTVYETQVINGTTWYHGKLSNGKVVWIKETDLRKELVKYYDSGLTLDQAVAIQ
KGLTAKPQIQHTPGKWEDATAREIKNAMDSSKLVKDETQKYQFLRLDKTQNIGSADLDKL
LVGKGILEGQGAAFSEAAKTYDINEVYLISHALLETGNGTSKLANGGDVVNNKVVTDGPN
KYYNMFGIGAVDSDAVKQGFITAKNNGWNTVKKAIVGGAKFISESYIDKGQNTLYKMRWN
PENPGVHQYATDVAWASHNATRIKGFYDSMDKLGKYFDVDTYK
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaaaaaaaacacttataaggtaccttcaattatagcattaacattagcaggt
acagctttgacaactcatcacgcacaagcggcagacaaaacgcaagatcaatcaactaac
aagaatattttaaatgatgataaagcacttaaccaaagtgaacaaattaagtctgaaatt
agtaaaccaacagcgaacatttcaggtacgcaagtctacaaagaccctacacaaatcaaa
caggcatctactgataataacttaaactatgatgctcaaattgatgaattgaacaatcaa
acttctgatcaaatgacaacgcaaaatacatataatcaaaacggtcaagatcaagaggca
caacaaaaagatgattctactgtaaaaactaatcaagaaaatgttgaaaacgaaattact
tctgatgaagcaactaacaatgttaacacatcagataatgtagaaaaacaagctactgaa
gctgttcaagaggatgacattgtatctgataaaggcaacgttacttctgataataaacaa
gatgtagctaaagacagcgataaatctgatgctgcttctagtgaacaaggtaataatgct
gttcaaaatgatagcgttgttactgataaagacaacgttacttctgatgattcacaagat
gtaactaaagacagcgataaatctgatgctgcttctagtgaacaagatactgaagctctt
caacaggatgacagtacatctgataaagacgacgttacttctgatgattcacaagatgta
gctaaagacagcgataaatctgatgctgcttctactaaacaagacagtaatactgttcaa
aaggatggcatcgcatctgataaagacgacgttacttctgatgattcacaagacgtagct
aaaaacagcgataaatctgatgctgcttctagtgaacaagatactgaagctcttcaacag
gatgacagtacatctgataaagacgacgttacttctgatgattcacaagacgtaactaaa
gacagcgataaatctgatgctgcttctactaaacaagatagtaatactgttcaaaaggat
gacagtacatctgataaagacgacgttacttctgatgattcacaagatgtagctaaagac
agcgataaatctgatgctgcttctaatgaacaagatagtaatgctgttcaacaggatgac
agtacatctgataaagacgaggttacttctgatgattcacaagatgtagctaaagacagc
gataaatctgatgatgcttctaatgaacaagatagtaatactgttcaaaaggatgacagt
acatctgataaaaacgacgttacttctgatgattcacaagatgcagctaaagacagcgat
aaatctgatgctgcttctaatgaacaagatagtaatgctgttcaacaggatgacagtaca
tctgataaagacgacgttacttctgatgattcacaagacgtagctaaagacagcgataaa
tctaatgctgcttctagtgaacaagatactgaagctcttcaacaggatgacagtacatct
gataaagacgacgttacttctgatgattcacaagacgtaactaaagacagcgataaatct
gatgctgcttctactaaacaagatagtaatactgttcaaaaggatgacagtacatctgat
aaagacgacgttacttctgatgattcacaagatgtagctaaagacagcgataaatctgat
gctgcttctactaaacaagacagtaatactgttcaaaaggatggcgcagagactactaaa
gcagtcaacactactttctatagtgcacaagctgcacctaaacttagagtagctagaagt
gccgattcaacagtcgcaacacgttctgcacttacaaaagaaacaacaactcgttcaaca
ttaccaaaatattcaccaaaagtgagttcttcaattaataattatattcgtaagaacaac
tttaaagcaccaaactatgaacaggatatagcatcatatttaccaaaatataattatcgc
tacggaaagcctgaaggtattgttatgcatgacactgctaatgataattcaactattact
ggcgaaatcaattttatgaaaaataattatcagaatgctttcgtacatgcatatgtagat
ggaaatcgtattattgagacagcaaatactgattacttagcttggggcggtggcgctgca
gctaatgagcgttttatacatgtagaattagttcatacacatgactatgattcttttgca
cgttcaataaataattatgctgattatgcagctacaaacttacaatattacggcttagtt
cctgatagtgctgaatatgatggtgtaggaactgtttggacgcaccaagcagtaagtact
ttcttaggcggtactgatcacactgaccctcatggttacttagctgcacacaactatagt
tataatgagttatatgaccttatttatgaaaaatatttaattaaaacgggtcaagcagct
gcttggggaacaccttcttcaggtagtacgagtggaactggctcaaataatactggttca
agcaacacaggtacgactgcacctactaaaacaggcactgtgaaagtaacagcgaataat
ggtgttggcagaattaatactactaacgatggtttatatactacagtatatgaccaaaat
ggtaagaaaactgaccgcacaaaccaaacacttaaagttacaaaatcagctactttaggt
aatgaaaatttctatttagtttctgatttcaataaaggtacattaatcggttgggtacac
caaggtgacgttaattataatactgctaaagcagcaactagtataaataaagcttataag
attaagcctggagaaacgttatatactgttccgtggggcacaagttctcaaaaagctgga
acagtttcaggtaaatctacacaaacgttcaaagcaacaaaacaacaacagattggtaag
actaattatgtttatggaactgtaaataatttatctggttgggtaagtttaagtaagtta
tcttcaacaagtaatactgctacttcccctactacaaattcagggaaactaactgtaagt
acacttacgaatcaacaaggtactgttgccaaaaataaccatggcgtatatacgactgta
tatgataaacaaggtgttcaaaaatcatacgttaatggcaaaacatataaactaagtaaa
aaagcaacattaggtaataatgcattttacttaattactgataataaaaccaatactaat
ataggttggatgcaaactggtgacatcaaagttaaagaagcagcaacaaaagctacttct
aaccaaacacaaaatataagtaaaattggtcagttaaatacgaagaattctggtattaaa
gctactgtttatgaccaacaaggtaaagacgctacaaaactagctggaaaaacttataat
gttactaaacaacgcactgaaggaaataaaacttatgtattaatccaaaatgttaatcaa
aatacgccaattggttggatcaatacaaaagatattaatactcgtaatttaagtcaagca
agtgctaaaaatggccaatatactgttaaagcaactaataatggtctttacgcagtacct
tggggcacaaaatcacaacaacttgatacacttaataatctaaaaaataatcaatttaat
gcatctaaatctgtttacgttgataaagatgaatacgtttatggtattgtaaacaataaa
actggttggatagctgcaaatgacttaaataagttacaatcagctaataacactaatgct
tcaaattctcaaaatattactaaatcagcggtaacaccgtataaatatgattatgttatt
ttcaataaaaatggaagctattatctagatccaacatctacaactgcagcaggttcactt
aaagatttctatgaaagtattttcacagtatacgaaactcaagtgattaatggcacaact
tggtatcatggtaaactttctaatggtaaagttgtttggattaaagaaactgatttacgt
aaagaattagtaaaatattatgattcaggccttactttagatcaagcagttgctatccaa
aaaggtttaactgctaaaccacaaatccaacatacacctggaaaatgggaagatgctaca
gcaagagaaatcaaaaatgctatggattcaagtaagctagtaaaagatgagactcaaaaa
tatcaattcttacgtttagataaaactcaaaatattggttcagctgatttagataaatta
cttgttggtaaaggtatattagaaggtcaaggcgcagcatttagcgaagcagctaagact
tacgatatcaatgaagtatatttaatctcacatgctctattagaaactggcaatggcaca
tctaaacttgcaaatggtggcgatgttgtaaacaataaagttgttacagatggtccgaat
aaatattataatatgtttggtattggtgctgttgatagtgacgctgtaaaacaaggattt
ataactgctaaaaacaatggttggaatacagttaaaaaagcaatagtcggtggcgctaaa
ttcatatctgaatcatatattgataaaggtcaaaatacactttataaaatgcgttggaac
cctgaaaatccaggtgttcaccaatacgcaacagatgtagcatgggcatctcataatgct
actcgaatcaaaggtttctatgattctatggataaattgggtaaatacttcgacgttgat
acgtataaatag
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integrated database retrieval system
