Shewanella psychrotolerans: K0I62_14740
Help
Entry
K0I62_14740 CDS
T09306
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
spsj
Shewanella psychrotolerans
Pathway
spsj01501
beta-Lactam resistance
spsj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0I62_14740
01503 Cationic antimicrobial peptide (CAMP) resistance
K0I62_14740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsj02000
]
K0I62_14740
01504 Antimicrobial resistance genes [BR:
spsj01504
]
K0I62_14740
Transporters [BR:
spsj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K0I62_14740
Antimicrobial resistance genes [BR:
spsj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0I62_14740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
QYK00639
LinkDB
All DBs
Position
complement(3327863..3331009)
Genome browser
AA seq
1048 aa
AA seq
DB search
MAQFFVTRPVYACVISIVIVLLGLIAMFKLPIDQYPYITPPQVKVSASYPGAASTTAAES
VATPLEQELNGLPNMIYMSSKSTNSGSANVTITFDVGTNPDLAAVDVQNSTQQAAGSLPI
DVQTEGVSVSKEASVELLKLALTSTDDRYDEIYLSNYATINIQAALKRIPGVGRVRNTGS
RSYSMRVWLKPDIMAGYGLTTSDVIAAVKAQNKESPAGAIGSQPNAESLSMTMPITAEGR
MSSVPQFKEIIVRANSDGSLIRLRDIARVELGSSSYTLQSQLNGINATILQVYLLPGANA
LEVTKNVKNEMATLAEKFPQGMNWEVFFDASIFIENSIDEVVKTLIEALILVILVVYLFL
QNFRATLIPAIAVPVSLVGTLAAMLAFGFTINTVSLLALVLAIGIVVDDAIVVVENVERL
MHEKGLNSVEATGVAMKELSGALVATSLVLAAVFVPVSFLSGITGIMYREFAIAITVAVL
ISTVVALTLSPALCALLLRPGDKATSGFFKWMNDKLDICTSKYVAIVALTARQATRSYLV
FAIMVGGVYMIMSNLPSSFMPDEDQGRFFIDMTLPDGATVNRSQAVLKKAEAKVLAHPAV
AYSFTLAGENRRSGSNQANGQFEIILKPWSERMQSDATVKKVMKEIDHALLDILEAEFNV
YLPSAVPGLGNGSGVEMELQDTSGTNFKGLMETAGELVEQLKLQPEIATAGLSLQSAIPQ
LHLTVDEAKAMAIGVNVADIYSTIKTFTDSSTVNDFNLFGRVYRVKVQAEESYRQFPEQI
KDYYVRSSSGAMVPIGVLAKYEYSVGPAAVTHYNLFSSASINATPAAGYASGDVIRAIER
VAKPILPNEFSYEWTGITYQEVQSANQTSIAVALAMLFVFLFLAALYESWTIPIAVLLIA
PIAMLGAALGTWVSGMESNLFFQVAFIALIGMAAKNSILIVEFANQLHKEGKGYLEAALE
AANMRFRPILMTSMAFILGVLPLVLSVGPGAVSRQSISIPILCGMVFATTIGIIMVPLFF
VTTAGWLKSKIKPGAANGRPAQEGNAHG
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggcacaattttttgtgactcggccggtgtatgcttgtgttatctccatagtgattgta
ctgcttggcttaattgccatgtttaaactgcccatagatcaatatccttatattacgccg
ccacaagttaaagtgtcggcttcctatcctggtgccgcatcgacaacggctgcagagtcg
gttgctacaccgttagagcaagaattaaacggtttaccgaacatgatttatatgagctct
aagagtactaactctggcagcgctaatgtcaccattacctttgatgttggcactaatcct
gatttggcggcggttgatgtgcaaaactcaactcaacaagcggctggaagcttacccatt
gatgtgcaaaccgaaggggtgtctgtatcgaaagaagcctcggttgagctacttaaatta
gcgttaacatcgaccgatgaccgctatgatgaaatctatttaagtaactacgcgaccatc
aatattcaagcggcccttaaacgtatcccaggcgtcggacgtgtgcgaaataccgggtca
cgcagctattcaatgcgagtctggttaaagcccgatattatggccggttatggtcttacg
actagcgatgtgatcgcggcggtgaaggcacagaataaggagtcgcccgcgggggcgatt
ggttcgcagcccaatgctgagtccctaagtatgacaatgcctatcaccgcagaggggcgt
atgagcagtgtgccacaatttaaagagattattgtgcgcgccaatagcgatggctctctt
atcaggttgcgtgatattgcgcgggtggagttaggctcgtcatcctacaccctacagtca
caactaaatgggattaatgcgaccattttgcaggtttatctgttacccggagccaatgcc
ctagaggtgaccaaaaatgttaaaaacgagatggcgacactggcagaaaagttcccgcaa
ggtatgaactgggaagtcttttttgatgcttctatttttattgaaaactcgattgatgaa
gtggtcaaaacgttaattgaagcattgatactagtgatattggtggtctatctgttcctg
caaaactttcgggcaaccttgatccccgcaattgcggtgccagtatcattggttggtacg
ctggcggccatgctggcgtttgggtttacgattaacactgtgagtttactggccttagtg
ctggcgatcggtattgtagttgatgatgccattgtggtcgtagaaaatgttgagcgctta
atgcatgaaaagggcttaaattccgttgaggcgaccggtgttgccatgaaagagctttct
ggcgcgctggtggcaacaagcttagtcttggcggcggtatttgtaccagtttctttttta
tcggggataaccggcatcatgtaccgcgagtttgccatagcgattaccgtggcggtgttg
atctctacggtcgtggcgctgacactgtcgccagccttatgtgccttattgctaaggcca
ggagataaggccacctcgggttttttcaaatggatgaacgacaagctggatatttgtacc
agtaaatatgtcgcgatcgttgcattaactgctcggcaggctacacgtagttatttggtg
tttgccattatggtcggtggcgtttatatgatcatgtcaaacctaccgtcgagttttatg
cctgatgaagatcaaggtcgcttttttatcgatatgaccttacctgatggcgcaaccgtg
aatcgttcacaagccgtgctaaagaaagccgaagccaaagtgttggcccatcctgctgtt
gcatattcgtttaccttggccggagagaatcgtcgttcaggctctaaccaagctaatggt
caattcgaaattattcttaagccttggtctgagcggatgcagagtgatgcaacggttaaa
aaagtgatgaaagagatagatcacgcgttactcgatatattagaagctgagttcaacgtg
tatttaccctcggcagtgccaggattaggtaatggttctggggttgaaatggagctacaa
gacacctctgggacaaactttaaaggcttaatggaaaccgctggtgagctggttgaacaa
cttaaattacaaccagaaattgcaacggcagggctgtctcttcaaagtgcgataccacag
ctgcacttaacggttgatgaagccaaagcgatggccattggcgttaatgtggctgatatc
tacagtacgataaaaacttttacagattcttctacggttaatgatttcaatttatttggc
cgtgtgtatcgagtaaaagtgcaagccgaggagagttatcgtcaatttcctgagcagata
aaagattactacgtgcgctcatccagcggcgctatggtgcctatcggtgtgctggcgaag
tatgagtattctgttggcccagctgcggtaactcattacaatttatttagcagtgcctcg
attaatgcaacgccggcagcgggttatgcctctggtgatgtgattagagccatagagcga
gtggctaaacccattttacccaatgagtttagttacgaatggacaggtattacttatcag
gaagtacagtcagccaatcaaaccagcattgctgtcgcgttagctatgttgtttgtattc
ttattccttgctgcactgtatgagagttggactatccccattgcggtattgctcatcgca
ccgattgctatgttgggggcggccttaggcacttgggtcagtggcatggagagtaattta
ttctttcaagtcgcctttattgctctcattgggatggcggcgaagaactctattttgatt
gtcgagtttgctaatcaattgcataaggaaggaaaaggttatcttgaggccgcgttagag
gccgccaacatgcgttttcgccccattctaatgacctcaatggcattcattttaggtgtg
ttgccgctggtgttatctgtggggccaggcgcggtgagtcgccagagcatctctatccct
attctgtgcggaatggtgtttgcgaccaccataggtattattatggtgcccctttttttc
gtcacgaccgcaggctggttaaaatctaaaataaagcctggcgcagcgaacggacgtcct
gcgcaggagggcaatgctcatggctaa
DBGET
integrated database retrieval system
