Shewanella psychromarinicola: EGC80_20720
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Entry
EGC80_20720 CDS
T09848
Symbol
bamB
Name
(GenBank) outer membrane protein assembly factor BamB
KO
K17713
outer membrane protein assembly factor BamB
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsr02000
]
EGC80_20720 (bamB)
Transporters [BR:
spsr02000
]
Other transporters
Pores ion channels [TC:
1
]
EGC80_20720 (bamB)
BRITE hierarchy
Motif
Pfam:
PQQ_2
PQQ_3
PQQ
YDG
Motif
Other DBs
NCBI-ProteinID:
AZG37050
LinkDB
All DBs
Position
complement(4773251..4774486)
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AA seq
411 aa
AA seq
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MKSWCKNLLAVGLSVALMSACSSSDVEEEPVSELVDIQATVFPEIIWDTSVGDGVGDYYS
QLRPSVRYGKVFVADRNGIVVAFDETSGDELWKQDFNDVFEQQLGTKTKGIRLAAGVTAA
RSKVFIGGETGLLVALDEATGDVVWSTQANGELLSAPTVAEDVVAVNTSKGTFEAFNVDN
GEKLWSYEMQLPNLTLRGTGSAVYEAGGFFLGSADGKIAVVVKSNGQAAWEQTVFSPTGA
NEFTRMADIDMTPLILGENLYVASYNGNLVSMELRNGRVVWSRKYSSFNDLAAAGISLFL
VDDHSRIYSVDRRNGLELWSNSELKNRQLTAPAVIDNYIVVGDFEGYLHFIDRISGEVVG
RIEVDSDGLYGQPLVVDDKIYVQGRSGKVAIVSLNKQEQKNLEEDTETDAE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgtggtgcaaaaatttacttgccgttgggttaagtgttgctcttatgtctgct
tgttcttcaagtgatgttgaagaagagcctgttagtgaattagttgatatacaagcaacg
gtgtttcctgaaattatttgggataccagtgttggtgatggcgtcggcgattattattcg
caacttcgtcccagcgtccgttatggcaaagtgtttgttgctgatcgcaacggtatagtt
gtcgcttttgacgaaacaagtggtgatgagctttggaagcaagactttaatgatgtcttc
gaacagcagcttggaaccaaaactaaaggcattcgtttagctgcgggtgttactgcggca
cgcagtaaagtgtttattggtggcgaaacgggcttattagtcgcgcttgatgaggcaacg
ggtgacgttgtgtggtctacgcaagctaatggcgaattattatcggcacccacagtggca
gaagatgttgtcgcagtgaataccagtaaaggcacatttgaagcatttaatgtcgataac
ggcgaaaagttatggagctatgagatgcaactgccaaacctcactttacggggtacgggt
tctgcggtttatgaagcgggcggtttctttttaggttctgcagatggcaaaatagctgtt
gttgttaaaagtaatggtcaagcagcgtgggaacaaaccgtttttagtccgaccggtgcc
aatgagtttacccgtatggccgatattgatatgacgccattaatattgggtgagaatctg
tatgttgctagttacaatggtaatttagtctctatggagcttcgcaatggtcgcgtagtt
tggtcgcgtaaatactcaagctttaatgatttggccgcagcaggtatcagcctgttttta
gtggacgatcatagccgtatttactcagtcgatcgccgtaatggtttagagctatggagt
aattctgagcttaaaaatcgtcagttaacggctccagcagtaatagataactatattgtt
gtcggtgacttcgaaggttacttgcattttatcgaccgtattagcggtgaggttgttggc
cgcattgaagttgacagcgatggcttatatggccaacctttagtggtggatgacaaaatt
tatgttcaaggtcgcagcggcaaagtcgccattgtgagtttgaacaaacaagagcaaaag
aatcttgaggaagataccgaaacagatgcggaataa
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