Shewanella psychrophila: Sps_00149
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Entry
Sps_00149 CDS
T05063
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw00521
Streptomycin biosynthesis
spsw00523
Polyketide sugar unit biosynthesis
spsw00541
O-Antigen nucleotide sugar biosynthesis
spsw01100
Metabolic pathways
spsw01110
Biosynthesis of secondary metabolites
spsw01250
Biosynthesis of nucleotide sugars
Module
spsw_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Sps_00149
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Sps_00149
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Sps_00149
Enzymes [BR:
spsw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Sps_00149
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AQS35369
UniProt:
A0A1S6HIN2
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Position
complement(154627..155172)
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AA seq
181 aa
AA seq
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MIITDTPIADLKLLSPRVHEDERGYFCETFRDAWFKQQIADVTFVQENHSRSIKGCLRGL
HFQSPRSQGKLIRVIVGEIFDVAVDLRENSPTLGQWFGTYLSAKNRHQMWIPAGFAHGFY
VTSSAAEIIYKCTAYYAPEFEKILAWNDETLAIDWPLEGQLPKLSNKDNQGLSFNAMTKG
R
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgattatcaccgacacaccaattgcagatctaaaactactctcacctcgagtccatgaa
gacgaacgcggctatttctgcgaaactttccgagacgcttggtttaagcagcagatagcc
gatgtgactttcgtacaggaaaatcatagtcggtcgataaaaggctgcttgaggggatta
cattttcaatcaccacgcagccaaggcaagctgatacgtgtgatcgttggcgagatattc
gatgtcgcggtcgatcttcgtgaaaacagcccgactttaggccaatggttcggtacatat
ttatcggcaaagaaccgtcaccagatgtggattcctgcaggctttgcccacggattttat
gtcacctcaagtgctgcagagataatctacaagtgtaccgcgtattatgcccccgagttc
gagaaaatcctcgcctggaacgatgaaactcttgccatagactggcctttagaggggcaa
ttacccaaattatcaaacaaagataatcaggggctttccttcaacgctatgaccaagggc
aggtaa
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