Shewanella psychrophila: Sps_01372
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Entry
Sps_01372 CDS
T05063
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spsw03009
]
Sps_01372
Enzymes [BR:
spsw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
Sps_01372
Ribosome biogenesis [BR:
spsw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sps_01372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TGS
FHA
Motif
Other DBs
NCBI-ProteinID:
AQS36539
UniProt:
A0A1S6HM22
LinkDB
All DBs
Position
complement(1510544..1511503)
Genome browser
AA seq
319 aa
AA seq
DB search
MNTEAPKQKVQLVTIDEDHLGQRIDNYLLTKLKGVPKSMIYRIVRKGEVRVNKKRIKPEY
KLQDGDIVRIPPVRVSDKSDRPGPSAKLTKVSQLESRIIFEDKSIIVLNKPSGIAVHGGS
GVDFGVIEAMRSLRPTQKFLELVHRLDKDTSGVLLIAKKRSALRHLHDQLRFKKMQKDYQ
ALVKGTWQARDKVIKAPLLKLTLKSGERIVRVNQEGKECETRFKILQRYQGATLVQASPV
TGRTHQIRVHCQYTGHPIACDDKYSEQKFDDSMGVHGLNRLFLHAAQLRFTHPGTEEIMV
VKAPLDPVLTQTLDKLVKV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgaagcacctaaacaaaaagttcaattagtcactatcgatgaagaccatctt
gggcagagaattgataattatttgctgacaaagttaaagggtgtccctaagagtatgatc
taccggatcgtgcgcaagggggaagtcagggtgaataaaaagcgcatcaagcctgagtac
aagttacaagacggtgatatcgttcgtatcccgccagttagagtatctgataaatctgac
cgtcctggcccttcggctaaattaactaaggtgtcacaactggaaagtcggattatattc
gaagataaatccatcatagtactcaataaaccttcaggtatcgcggttcatggaggtagt
ggcgtcgatttcggagtcatagaagccatgcgctccttaaggccgactcagaagtttctt
gaattagtgcatcgtctcgataaagatacttcaggggtattgttgattgcgaaaaaacgc
agtgcattaaggcatttgcatgatcaactcagatttaaaaagatgcaaaaggattaccag
gcactagttaaaggtacctggcaagcccgtgataaagtcattaaagccccgctacttaaa
ctgaccctaaaatcaggcgagcgtattgttcgggttaatcaagaaggaaaggagtgtgag
acgcgcttcaaaattttgcagcgctatcaaggtgcgacgttagttcaagccagtccggta
acaggcagaacccatcagatccgtgttcattgtcagtatacgggccatcccatcgcctgt
gatgacaaatacagtgaacagaaatttgatgattccatgggagttcatggtttaaatcgt
ttatttcttcatgctgcccagcttagattcactcaccctggaacagaggaaattatggtt
gtcaaagcgccactcgatccggtactcactcaaactttagataaattggtgaaagtatga
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