Shewanella psychrophila: Sps_02316
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Entry
Sps_02316 CDS
T05063
Name
(GenBank) hydrophobe/amphiphile efflux-1 (HAE1) family transporter
KO
K18138
multidrug efflux pump
Organism
spsw
Shewanella psychrophila
Pathway
spsw01501
beta-Lactam resistance
spsw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Sps_02316
01503 Cationic antimicrobial peptide (CAMP) resistance
Sps_02316
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsw02000
]
Sps_02316
01504 Antimicrobial resistance genes [BR:
spsw01504
]
Sps_02316
Transporters [BR:
spsw02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Sps_02316
Antimicrobial resistance genes [BR:
spsw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Sps_02316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
AQS37474
UniProt:
A0A1S6HPP7
LinkDB
All DBs
Position
complement(2653355..2656474)
Genome browser
AA seq
1039 aa
AA seq
DB search
MISEFFINRPKFAFVISTVLTLVGLISIPILSVSEFPEIAPPQINVSTSYSGASANIVRD
TIAQPLEAEVNGVEDMLYMESKSANDGSYSLSVTFDVGTDADMAQVKVQNRVQQAMPRLP
SEVQRQGVTVEKQSPNILMVVNLVSPKETFDSLFITNYAGLNVTDSLARQNGVSKVQVIG
ALDYAMRIWLDPDKMASFGVTASDVIASLQEQNIQVAAGRIGAAPVDPDQQFQYTLQTKG
RLKDPQEFRQVMIRANNDGSKVVVGDIARVELGSQTYDAQGKLNNKPSAIISIYQSPDAN
ALEVGAAIKTEMAKLSKQFPKDLEYEVLYDTTEFVETSIKEVVQTLFISIALVVLVVFIF
LQDVRSTLVPAIAIPVSLIGTFAFLLVFGMSINTVSLFALILAIGIVVDDAIVVVENVTR
LMESEGLSPKEATSKAMKEVTGPIIATTLVLLAVFAPTAVMPGITGQMYAQFSVTICIAV
LISSINALTLSPALCASLLRPPKKHTKGFHATFNKHFERVTGKYMKLVSSLTRKLSLVLI
VYVCLIALTGGLAKILPSGFVPMEDKKSFMVDIQLPDGASLNRTEEVMRELVELTLAEPG
VENVIHASGFSILSGSVASNGGLMIVILSTWEERDTPDMVEAAIVAKLQAKYSANPSVKA
MAFSLPPIPGVGSVGGFEFVLQDTQGRTPQELASVMRALIMKANEQPEIAMSFSNFRADV
PQMYVDVDRDKAKALGISLNEIFSTMQTMLGSMYVNDFNRYGKVFRVILQAEGEFRNSDQ
DISRFYVRSKSGEMVPLSTLVTVTPILGPDVMTSYNMFSSTTINGFPAAGFSSGDAISAM
ERAANETLPAGYTFEWTGQTYQEIKAGNLAPLIFALALVFTYLFLVAQYESWTIPFAVIL
AVPIAVLGAFLNIWLVGADLNLYAQIGLVLLIGLACKNAILIVEFAKQLREEGKSILDAG
ETAARLRFRAVLMTAFSFLLGVLPLVIATGAGAGSRRALGYSVFGGMLAATIVGTLLVPV
FYVMMQKMREKFKGEAKAT
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgattagtgaattttttatcaacaggcctaagtttgccttcgtcatttcgacggtattg
acgcttgtgggtctgatttctattccgatcttgtctgtgtcggaatttcctgagatagcg
ccacctcagattaatgtgtcgaccagctattccggtgccagtgctaatatcgttagagat
accatagcccagccactggaagcggaagtgaatggcgtcgaagacatgctctatatggag
tctaagagcgccaacgatggtagctactccttgagtgtgacattcgatgtgggtaccgac
gccgacatggctcaggtaaaagtacagaaccgcgtacaacaggccatgccaaggctaccc
tctgaggtgcaacgtcaaggtgtcacggttgagaagcagagcccgaacattttgatggtg
gtgaacttagtatcccccaaggagactttcgattctctgtttatcaccaactatgctgga
ctcaatgttaccgactcattagcgcgccaaaatggtgtgtctaaagtacaggtgattggt
gcgctggattacgccatgcgtatctggctcgatccagataaaatggccagttttggtgta
acggcgtcggatgtcatcgcttctctacaagagcagaacattcaggtcgcagcggggcgt
attggcgctgctccagtggatccggatcaacagtttcagtacacattacaaaccaaagga
cgtttgaaggatccccaagagtttcgtcaggtgatgatccgcgccaacaacgatggctct
aaagtggttgtcggcgacattgctcgcgtcgaacttggctctcagacctatgatgcacaa
ggtaagctcaataataagccttcggcaattatctccatttatcagtcacccgatgctaat
gcattggaagttggtgcggcgattaagactgagatggccaagctgtctaagcagtttcca
aaagatttggaatatgaggttctctatgacaccaccgagtttgtggaaacctcaatcaag
gaggtagtgcaaaccctgtttatctccatagcacttgtagtcttagtggtgtttatcttc
ttgcaagatgtacgctcgactctggttcctgccattgctattcctgtttcactaatcggt
acatttgccttcctgctcgtttttggcatgagtataaacactgtatctctgtttgccctg
atcttggccataggtattgtggtcgatgatgcgattgtggtggtggagaacgtcacacgc
ttgatggaaagtgagggattatcacccaaagaagcgacatctaaagcgatgaaagaggtc
actgggcctattatcgcgactaccttagtattattggcggtgtttgctcctacggccgtc
atgcctgggatcacgggtcagatgtatgcccagttctctgtgaccatatgtatcgcagta
ctcatttcttcgattaacgccctgacattaagtccagctctgtgtgcctctcttctgagg
ccgccaaagaaacataccaaaggcttccatgccaccttcaacaagcattttgagcgtgtg
acaggtaagtacatgaagttggtgtcatcactgactcgtaaactttctttagtcctcatt
gtttatgtttgtctgatcgccctaacgggaggcttagctaagatcttaccttctggcttc
gtgcccatggaagataagaaatcctttatggtggatattcaattgccagatggtgcgtca
cttaaccgtaccgaagaggtgatgcgagagctggtcgagttaacgttagccgagccaggg
gtcgaaaatgtgatccatgccagtggtttcagtatcttatcagggtcagtagcctctaat
ggcggtttgatgatcgtgattctctcaacttgggaggagcgagatacaccggatatggtg
gaggctgcgatagttgccaagctgcaagctaagtactcggctaatccttcagtgaaagcc
atggcattctcactgccgcctattcctggcgtgggtagtgtcggtggcttcgagttcgtg
ttgcaagatactcagggaagaacgcctcaggagctagcttctgtgatgcgagccttgatc
atgaaagccaatgaacagcctgaaatcgccatgtcattcagtaatttccgtgcagatgta
ccgcagatgtacgtggatgtagacagagacaaggcgaaggcgttagggatttctcttaac
gagattttctcaaccatgcaaaccatgctgggctccatgtacgttaacgatttcaaccgt
tacggcaaggtatttagggtgatcttgcaggccgaaggagaatttcgaaattctgatcaa
gatatctcgcgtttctatgtgcgctctaaaagcggggagatggtccctctgagtacactc
gtgacagtgaccccaatattaggtcctgacgtgatgacctcatataacatgttcagctcg
accaccatcaatggattccctgcagcaggttttagttcgggcgatgcgatttcagccatg
gagcgagcggctaatgagactctgcctgcgggttatacgttcgagtggacgggtcagact
tatcaagagattaaggcgggtaatttagcgccgttgatttttgctctggctttggtgttt
acctaccttttcttagtggctcagtacgagagttggaccatacccttcgcggttattctg
gctgtgcctattgcggtattaggggctttccttaatatctggctggtgggcgcagacttg
aacctctatgcacagataggtctggtgctcttgattggattggcgtgtaagaatgctatt
ttgattgtggagtttgccaagcaactgcgtgaagagggtaagagtattctcgatgcgggg
gaaacggctgctagattgagattccgagcggtattgatgacggctttctctttcttgctt
ggggtattacctctggttatcgcaacaggtgctggtgcgggaagtcgacgtgccttaggt
tattcggtgtttggcggtatgttagcggccactatcgttggtaccctgttagttcctgtt
ttctatgtgatgatgcagaagatgcgagagaagtttaagggagaagctaaagcgacataa
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