Shewanella psychrophila: Sps_03945
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Entry
Sps_03945 CDS
T05063
Name
(GenBank) malate synthase
KO
K01638
malate synthase [EC:
2.3.3.9
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw00620
Pyruvate metabolism
spsw00630
Glyoxylate and dicarboxylate metabolism
spsw01100
Metabolic pathways
spsw01110
Biosynthesis of secondary metabolites
spsw01120
Microbial metabolism in diverse environments
spsw01200
Carbon metabolism
Module
spsw_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
Sps_03945
00630 Glyoxylate and dicarboxylate metabolism
Sps_03945
Enzymes [BR:
spsw01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.9 malate synthase
Sps_03945
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GFIT
Motif
Pfam:
MS_TIM-barrel
MS_C
MS_N
HpcH_HpaI
Motif
Other DBs
NCBI-ProteinID:
AQS39060
UniProt:
A0A1S6HU25
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All DBs
Position
4506058..4507701
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AA seq
547 aa
AA seq
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MNSETILEKQGSVCIDVIGTKKNTEYAHILSKDACKFLSALVTQFAARRDELLDLREVRQ
AEFDGGALPGFRQDTQRIRDDKSWKVSSIPGPLQDRRVEITGPVDRKMVINALNSDAKVF
MCCFEDASAPSWDNMINGQINLRDANNRSISYYDMDKNKHYQLNDDPALLIARPRGIHLP
EEHIHYNGRAIPGCLMDFALYFFHNYQTRAKQGLGVYYYIPKLESMEEAQWWDDIFSFTE
AYFGVSTGTIRATILIETLPAVFQMDEILYAMRDHIVAMNCGRWDYIFSYIKTLKNHPDR
ILPDRHEVGMDKAFLNAYSQLLVRTCHQRGALAMGGMSAFIPNNDPQIMQNVLDKVVEDK
RRESKNGHDGTWVAHPHLVATAMDVFNQHLKGKVNQLGFDSSAVDEVSAARLLEPCSGGR
NQAGVRKNIRIALYYIEAWIQGVGCVPIYGLMEDAATAEISRASIWQWIHHGVKLDDGQV
FTTALFRTWLTQELDTIKAEVGEARFDKGRFLETARLFDEISTSAEFAPFLTLPSYPLLL
GENLNQK
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgagacgattttagaaaaacaaggctctgtgtgtatcgacgttatcggcacc
aaaaagaataccgaatacgctcatatactttctaaggatgcctgcaaattcttaagtgca
ctagtaacccaattcgctgcgcgccgtgatgagctattggacttacgcgaagtaaggcaa
gccgagtttgatggcggcgcactgcctggttttcgacaagacactcaacggatccgtgac
gataaaagctggaaggtctcgtccattcctggcccactacaagatcgtcgagtcgaaatc
accgggcccgtcgatagaaaaatggtcattaacgccttaaattccgatgcaaaagtgttt
atgtgttgttttgaagatgcatcagccccttcatgggacaatatgatcaatggtcagatc
aacctgcgagatgctaacaacaggagcatcagctattacgatatggacaaaaacaagcat
taccagctcaatgatgatcccgctctactcattgcacgcccccgaggcatacacctaccc
gaggagcacatccattataacggccgtgccattcctggttgtttgatggattttgcactt
tacttcttccataattatcagactcgtgcaaaacaaggtctgggggtgtattactacata
cctaaactcgaaagtatggaagaagcccagtggtgggatgatattttcagctttaccgaa
gcctatttcggcgtcagtacaggcacgattcgagcaacgatattgatcgaaacgctaccg
gctgtgttccaaatggatgagatcttgtacgcgatgcgtgaccatattgttgcgatgaat
tgtggtcgatgggattacattttcagctacataaaaaccttaaaaaatcatcccgaccgc
atcctacccgaccgccatgaagtcggtatggataaggcatttctcaatgcatacagccaa
ctattggtgcgtacttgtcaccaaagaggtgcactggctatgggtggcatgtctgccttt
attccaaataatgatccccagataatgcaaaatgtactcgataaggtggtagaggataag
cggcgggaatctaaaaacggacacgacggcacctgggtcgctcatccacacttagtggcc
actgcgatggatgtgtttaaccagcatcttaaaggtaaagtaaaccaattaggttttgac
tctagcgccgtagatgaagttagcgcagcacgcttacttgagccgtgttcaggcgggcgt
aaccaggctggcgtgcgcaaaaacatccgtattgcgctctattacatcgaggcgtggatc
caaggagtcggctgcgtgcctatctatggcctaatggaagatgccgcaaccgccgagatc
tcacgtgcgagtatctggcagtggatccatcatggggtgaaattggatgatggacaagtc
ttcaccacagcgctatttcgtacttggctaacgcaggagctggacaccatcaaggctgaa
gtcggcgaagcacgattcgataagggtcggttccttgaaacggctcgcctcttcgatgag
atatcgacgtctgccgaatttgcgcctttcttaaccttgcccagctatcccttactatta
ggcgagaacctaaatcagaaatag
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