Shewanella psychrophila: Sps_04082
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Entry
Sps_04082 CDS
T05063
Name
(GenBank) sodium ion-translocating decarboxylase, beta subunit
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw00362
Benzoate degradation
spsw00620
Pyruvate metabolism
spsw00650
Butanoate metabolism
spsw01100
Metabolic pathways
spsw01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
Sps_04082
00650 Butanoate metabolism
Sps_04082
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Sps_04082
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsw02000
]
Sps_04082
Enzymes [BR:
spsw01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
Sps_04082
Transporters [BR:
spsw02000
]
Other transporters
Primary active transporters [TC:
3
]
Sps_04082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
Motif
Other DBs
NCBI-ProteinID:
AQS39197
UniProt:
A0A1S6HUG0
LinkDB
All DBs
Position
complement(4644819..4645949)
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AA seq
376 aa
AA seq
DB search
MDGLIAFWSESGIANFTGGQLLMMAVGALLLFLAIVKGFEPLLLLPIGFGAILANIPNGG
FTDEGGLLFLAYHVGIETGVFPLLIFMGVGALTDFGALIANPKMLLLGAAAQFGIFATLI
GAIALNWVPGFEFTMKDAGAIAIIGGADGPTAIFLASKLAPELLGAIAVAAYSYMALVPL
IQPPIMRLLTTESERQIKMEQLREVSKKEKIIFPLMVLGLTILFLPAATPLVGMFCLGNL
MRESGVVDRLSNTAQNELINIVTIFLGLAVGSKLSADKFLQLETLGILVLGAIAFAIGTA
TGVLMAKLMSKLSGGKINPLIGAAGVSAVPMAARVVNKVGLESNQHNYLLMHAMGPNVAG
VLGSAVAAGVLIAVLG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggacggattaattgcattttggtctgagtcaggcatagcaaattttacaggcggccag
ctacttatgatggctgtgggtgctttgctactttttctggcgatagtgaaagggtttgag
cccctgttactgttacctatagggttcggggctatcttggccaatatacctaatggtggc
ttcaccgatgaaggtggtttgctctttcttgcctatcatgtgggcatagaaaccggggtg
tttcccctattaattttcatgggagtaggggcattaaccgattttggtgccttaatcgcc
aaccctaagatgttattgttaggcgcagcggctcagttcggtattttcgcaaccttaatc
ggagcaatagcgcttaactgggtacctggtttcgagttcaccatgaaagatgctggagcc
atcgctatcataggtggtgccgatggccctacagccatctttttagcctctaaactcgct
ccggaactcttgggggccattgcagtagcagcatattcttatatggctctggttcctctg
atccagcctcctataatgaggctgttaactactgagtctgagcgtcagataaagatggag
cagttgcgtgaagtgagcaaaaaagagaagatcatctttcctttgatggtgctgggacta
accatcttgttcctaccagcagctacgcctctggtaggtatgttctgtctgggcaacctg
atgcgggaatccggtgtggtagatagattgtccaacacagctcagaatgagcttattaat
atagtgactatcttccttggcttagctgtcggttctaaattatctgccgataaattcctt
caacttgagaccttagggatcttagtgttgggcgcgatagcgttcgccatcggtacggct
actggcgtcttgatggctaagttaatgagtaagctctctggtggtaagattaacccgctg
attggtgccgcaggggtctctgctgtgcctatggccgctagagtggttaacaaggtggga
ctagaatcgaatcagcataactatctgttgatgcacgccatggggcctaatgtagctggt
gtactcggctcggccgtagccgctggggtgttgattgcagtgttgggttaa
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