Shewanella psychrophila: Sps_04474
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Entry
Sps_04474 CDS
T05063
Name
(GenBank) hydrophobe/amphiphile efflux-1 (HAE1) family transporter
KO
K18138
multidrug efflux pump
Organism
spsw
Shewanella psychrophila
Pathway
spsw01501
beta-Lactam resistance
spsw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Sps_04474
01503 Cationic antimicrobial peptide (CAMP) resistance
Sps_04474
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsw02000
]
Sps_04474
01504 Antimicrobial resistance genes [BR:
spsw01504
]
Sps_04474
Transporters [BR:
spsw02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Sps_04474
Antimicrobial resistance genes [BR:
spsw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Sps_04474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
AQS39560
UniProt:
A0A1S6HVG7
LinkDB
All DBs
Position
complement(5075346..5078474)
Genome browser
AA seq
1042 aa
AA seq
DB search
MISKFFLDRPKFAIVLSLIITLAGIIAIPNLAVSQFPVITPPQVQVTASMRGASASVVEE
TIARPIEDAINGVEDMIYMSSKSSNDGTYRLSVTFEVGTDPNIAQVNLQNRLALAEPMLP
AEVLGNGLSVKKYSPDILMMIDFTSTDGQISERVLSSFVALQVTDKLTRIKGISESVLYG
NRFLSMRMWLNPDRMAHLNITASDVQQALLEQNIQVPLGSVGARPSDKPLELQYSLLTQG
RLSTVEEFENVILRADKSGHTVYLKDVASVELGQEDYVGAGISDGKPSAQIQVTTLPGAN
AIEVADAVKSVLKEMEPQMPEGMLYNTQVDTTLFVTESIKGMLWTLVMAVILVVLVTYLF
LGSVRATLVPLIAIPISIVGSFALMLAAGFGINTVTLFGLILAIGIVVDNAILVIENVEA
NLARDPSLSAKVATEQAMKQVTGPIITSTLVLLAVFIPVTLLPGVTGIMYQQFAMTLIFS
LILSAVVALSLSPVLCSLLLKPGVQDYPKWYICFNRFFDNVTANYSRATSVLIRKSVVLV
ILSLGTFVALGYLVQSTSTSFVPKEDKGVFFVNLILPDGASLSRTEQAITKVEDFLKSEP
GVANVASASGYSGLSGSMQSNAARMFVSLTHWDERFAMDGGHGVEDIIARVDKWAEAELP
EAKVISFGPPTIPGIGSGTGFEFVLQDTLGRDKAELSDVMQDLIYRANQEPELQGVFSAF
RANVPHYYLDIDRLKAKQLGVPLSEVFLTLQINLGSLYINDFTQFGKSFKVTLQADGAFR
ESVKDIARYQVRSQSYEMIPLSTLVSVKPTLAPDIIWRYNKYGASIIQGQAAPGFSTGDA
MVAMERVAAEVLPQGYTYEWSGLSYQEKLAGNMAIYAFGLALIFIYLLLVAQYESWTLPF
AIILVVPTAILGGMLALKLGGFSLSLYAQIGLVLLIAMAAKNAILIVEFSKLKREAGLSI
IEAAKQGGELRFRAVNMTSWSFILGILPLLFASGAGAVGLQNIGFTLVGGLLSVLLIGSF
FVPGYYALIQASKERFMERFFK
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgattagtaagttctttctcgacaggcctaagtttgccatcgttttgtctttgattatt
accttggctgggatcatcgcgatacctaacctggccgtgtcgcaatttcccgttattaca
ccgcctcaagtgcaggtgacagcatcgatgcgcggggcgagtgcatctgtggttgaagag
accatagctaggcctattgaagatgccatcaatggcgttgaagatatgatctatatgagt
tctaaaagtagcaacgatggcacttatcgtctatctgtgacctttgaggtgggcacagat
ccaaatattgctcaggtcaatttacaaaatcgtctggcattagctgagcccatgcttcct
gctgaggtgttggggaatggcttaagcgtgaaaaaatactcgcctgatattcttatgatg
atcgattttacctcaacagatggccagataagtgaacgagtgctgtctagctttgtggcg
ctacaggtcacagataagttgaccagaattaagggaatatctgagtcggtactttacggt
aatcgctttctcagtatgcgaatgtggcttaatccagataggatggcgcacctgaatatt
accgcttctgatgtgcagcaggcgctgcttgagcaaaacattcaggttccattaggtagt
gttggcgcgagacctagcgataaaccccttgagctacagtattcgttgctgactcaaggt
cgcctttctacggttgaggagtttgagaatgtcatactgcgtgccgacaagtcgggccat
accgtttatctcaaagatgttgcatctgtggagttgggccaggaagactatgttggcgcg
gggatcagtgatggtaagccatcggcgcaaattcaggtaaccacgctgccgggagctaac
gccattgaggttgccgacgcggtaaaatctgtactcaaagagatggaaccccagatgcct
gaggggatgctctataacacccaagttgataccacattatttgtgacagagtcgattaag
ggcatgctgtggacgctcgtcatggcggtcattctggtggtgctagtgacctatttattt
cttgggtctgtaagagccaccttagtgccgctaatcgctattcctatctcgatagtcggc
agctttgccttaatgttagctgctggctttggcattaataccgtgaccttattcggctta
atattggccataggaattgtggtggataatgccattttggtgattgagaatgttgaagcc
aacttagctcgagatccttctcttagcgctaaagtggccacagagcaggcgatgaagcag
gtcacaggcccgattatcacctctacactcgtcttgttagccgtgtttattcctgtgact
ctattgcccggggttaccggaatcatgtatcagcagtttgccatgaccttgatattttca
ctgatcttgtcggctgtggttgccttgagtttaagtcctgtcttgtgttccttgttatta
aagcctggcgtacaagattatcctaagtggtatatctgctttaatcgattttttgacaat
gtcaccgcaaattacagtcgggccacctcggtattgatcagaaagagtgtggtgttagtg
atactttcgctggggacatttgtggcactgggttatctggttcaatcgacgtccaccagt
tttgtacccaaagaggataaaggggtcttttttgttaatcttatcttgcccgacggcgcg
agtttgagtcgcacagagcaagcgatcacaaaagttgaagactttctcaagtctgagcct
ggcgtcgctaatgttgcttcagcgtcgggctattcaggtttatccggttcaatgcaatcc
aatgctgccagaatgtttgtcagcttaacccattgggatgaacgttttgcaatggatggc
ggccatggcgtcgaggatattatcgccagagtagacaagtgggccgaagcggagttacct
gaggcgaaggtcattagctttgggccaccaaccattccgggtattggctctggcactggg
tttgagtttgtgctgcaagataccttaggtagagacaaggcagaacttagtgatgtgatg
caagaccttatctatcgcgcgaatcaagagccggaactccagggcgtattcagcgcgttc
agggctaatgtaccgcactattatctggacatagacaggttgaaagccaagcaacttgga
gtgccattatctgaggtgttcttaaccttgcagataaatctgggatccttgtatatcaat
gattttactcagttcggtaagtctttcaaagtgacattacaggccgatggggcatttaga
gagtcggtaaaagacattgccaggtatcaggtgagaagccagagctatgaaatgattcct
ttaagcacgctggtgtcagttaagccgacattagcgcctgatattatctggcgctataac
aagtacggcgcaagcatcattcagggccaggccgctccgggcttttctacgggggatgcc
atggttgccatggagcgagttgctgcagaagttctgccccagggttatacctacgagtgg
agtggcctttcgtatcaagagaaacttgctggcaatatggccatttatgccttcggtttg
gcactgatatttatttacctcttgctggtggctcagtatgagagctggacgctgcccttt
gccattattctggtggtacctacggctattttaggcggcatgctggcgctcaaactgggt
ggtttttctcttagcttgtatgcccagattggcttggttttgcttatcgccatggcggca
aagaatgccatcttgattgttgagttttccaaattgaaacgagaagcaggcttatcaatt
atcgaggccgcaaaacaaggcggtgaattgagatttagggcggtgaacatgacctcgtgg
tcgttcattttagggatcctgccgttgctatttgcctccggtgctggcgcggtgggccta
cagaatatcgggtttactttagtgggtggcttattgagtgtattactcattggttccttc
ttcgtacctggctattacgcgcttattcaagcatccaaggagcgttttatggaaagattt
tttaagtga
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