Strongylocentrotus purpuratus (purple sea urchin): 581057
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Entry
581057 CDS
T01019
Name
(RefSeq) probable ATP-dependent RNA helicase DDX47
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spu03009
]
581057
Enzymes [BR:
spu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
581057
Ribosome biogenesis [BR:
spu03009
]
Eukaryotic type
90S particles
Helicases
581057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
581057
NCBI-ProteinID:
XP_030839930
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MSAPTSKSSDEEKIETLKENVTFKSLGVVDVLCEACDKLKWKTPSKIQTEALPVALQGKD
VIGLAETGSGKTGAFALPILQALLETPQRLFALVLTPTRELAYQIAEQFEALGSTIGVSC
VVIVGGIDMMTQALQLAKKPHVMIATPGRLVDHLENTKGFNLRGLKYLVMDEADRILNMD
FEAEIDKILKVIPKQRRTYLYSATMTKKVAKLQRASLQDPVKVEVSTKYQTVSKLQQSYI
FIPAKYKDCYLVSILNEFAGNSFMVFCSTCNNTQRVALLLRNLGLTAIPLHGQLSQSKRL
GTLNKFKSKSRSILIATDVASRGLDIPHVDCVINFDIPTHSKDYIHRVGRTARAGRAGKA
ITFVTQYDVELYQRIEQLIDKKLPLFKTEEEEVMMLMERVTEAQRYAKMEMRDSDEKKKG
GRSRGRDSKEDSEEFTGVRKRMKVKQQGRR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctcccacgagtaaatcgtctgacgaagaaaaaatagaaacgttgaaggaaaat
gttacattcaagtcacttggtgttgttgatgtgttgtgtgaggcttgtgacaagctaaaa
tggaagacaccatccaagattcagacagaggcacttcctgtggcattacaaggtaaagat
gtgattgggctagcagagacagggtcggggaagaccggagcctttgctttgcccatcctg
caagccctattggagactcctcagaggttgtttgctctcgtccttactccaaccagagaa
ctggcctatcagattgcagaacagtttgaagccttgggttctaccattggagtatcttgt
gttgtgattgtaggaggtattgacatgatgacccaagccctgcagctggccaagaaacct
catgttatgattgccactcctggtcggttagtggatcatctggagaacacgaaaggcttc
aatctcagaggactcaaatacttggtgatggatgaagctgatcggattcttaacatggat
tttgaggccgagattgacaagatcctcaaggtcattccaaagcagagaagaacctatctt
tactcggctactatgacaaagaaggtcgcgaagctccagagggcgtccctccaagaccca
gtcaaggtcgaagtttcaaccaaataccagacagtcagcaaactccagcagagctacata
ttcatcccagccaagtacaaggattgctaccttgtgtccatcttgaatgaatttgctggg
aattccttcatggtcttctgcagtacatgtaacaacacacagagagtagcattgcttctc
aggaatctaggtctcacagctatacctctacatggacagctgagtcagtctaagaggctt
ggcacactaaacaagttcaagtcaaagagcagatctattctgatagctactgatgtagca
agcagaggacttgacataccccatgtagactgtgtcatcaactttgacattccaactcat
tcaaaggactatatccacagagtaggaaggacagctagagccgggagagcaggcaaggca
atcactttcgtcactcaatacgatgttgagctgtaccagaggatagagcaactgattgat
aagaagctccctctcttcaagacggaagaggaggaggtgatgatgttgatggagagggtc
acggaggcgcagagatacgctaagatggagatgagagactctgatgagaagaagaaagga
ggtcgcagcagaggtcgcgattcaaaggaagacagtgaagagttcacaggggtcaggaaa
cgtatgaaggtcaaacagcaaggcaggaggtga
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