Strongylocentrotus purpuratus (purple sea urchin): 589021
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Entry
589021 CDS
T01019
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03013
Nucleocytoplasmic transport
spu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
589021
09122 Translation
03013 Nucleocytoplasmic transport
589021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
589021
03041 Spliceosome [BR:
spu03041
]
589021
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
589021
Spliceosome [BR:
spu03041
]
Complex C
Other components
EJC/TREX
589021
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
589021
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
TubC_N
Motif
Other DBs
NCBI-GeneID:
589021
NCBI-ProteinID:
XP_030839467
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MATSESRFDFEASRGKYLISLDESRKKQSVSCLKKCADSLEGSDAEKKTALDQAYRNYVK
KLVVGGSSCSDFTSLVHLSTEAVEAGLCSPATPFLLLTDIFDSVTISVCKDVFQFVEDRV
ATWKQSDFYSSGKNYLLRMCNDLLRRLSKSQDMVFCGRIQLFLARFFPLDEKSGLNLMSN
FHLDNVTSYNRTKLEGPLRTRVPQAIDKQDSMDYEEGEMGSATPVDYKLYRQFWALQDFF
RAPLQCYTKEKWKDFSNNAIAVLEAFHSMKLEDVASGKKKKKRRSHHRQQQKQGEEEEAD
SGDQVSFAKYLTSEKLFDLQLSDAMFRRYVYVQFLILFQYLNQQVKFKQAHHVLTDEMSL
FIKETKDKVVALLKETPPYGDQFTAGIEHILSREEHWNAWKNEGCPSYVKEKGKTEQARP
KSRARKRTLGEELNLAGAAKKIDLGSPELTKLWNVYPSNLEACAAEDRIFLPQVEEFFQD
AIDQADPEAMIEPEYKVVNNSNYAWQAIRLLAKRSPHFFQTVTATNPPLKTVPGYLEYMV
TKIAKELPQNEESKPEELKTEEETTENDELLKGPEEGMDKSPSAAVTEEQFTLVASKIGD
SWQTLAVELGFSDDEVTAILSETSDIKEQTKLMLQQWQDKEGAEPSRETLIAGLMESGLD
DIVESVFMEKQKKVELVFEEKQKRVVENGEGIVAESEPMEMDS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctccgaatcacgttttgactttgaagcttcgaggggaaaatacttgattagt
ttggatgaatctcgcaagaaacaatccgtttcctgtctaaaaaaatgtgcagactcactt
gaagggagtgatgcagagaagaagactgcgttggatcaagcatacagaaactatgtgaag
aagcttgtggtcggtggttcaagctgcagtgacttcacctccctggtccacctgtctacc
gaggccgtagaggcgggtctctgctcccctgcgaccccgttcctcctcctgaccgacatc
tttgattccgtcaccatcagcgtctgcaaagatgtcttccagtttgtggaagatagggtg
gccacatggaagcagagtgacttctattcttcaggaaagaattatctgctcaggatgtgc
aatgatttattgaggaggttatccaagtcacaggacatggtgttctgtggtcgaatccag
ctcttcttggccaggttcttccctctagatgaaaaatcaggtttgaatctaatgagtaac
ttccatctagacaatgtgacctcatacaacagaaccaagctggaagggccacttcgcaca
agggtcccacaggccattgacaaacaggactccatggactatgaggagggggagatgggt
tctgcgacccccgtcgactacaagctctatcgtcagttctgggcccttcaggacttcttc
agggctcccctccagtgctacaccaaggagaagtggaaggatttctccaataatgccata
gctgtcctcgaggccttccacagcatgaaactggaagacgttgcaagtggtaagaaaaag
aagaagaggcgtagccaccatcgtcagcagcagaagcaaggagaggaggaggaggctgac
tcgggtgatcaggtgtccttcgcaaagtacctcaccagcgaaaagttgtttgatcttcag
ctgagcgacgcgatgttcagacgctacgtctacgtccagtttctcatcctctttcagtat
ctcaaccaacaagtcaagttcaaacaagctcatcatgtgctcactgacgagatgtccctg
ttcatcaaagaaaccaaagacaaggtcgtcgctctcctcaaagaaaccccaccctatgga
gaccagtttactgcagggattgagcacattttgagcagagaagaacactggaatgcctgg
aagaacgagggatgtccaagctatgtcaaggaaaaagggaaaacagaacaagccagacca
aagtcaagagccaggaagaggacattgggggaagagctgaatctagctggagctgccaag
aagattgatttgggtagtcctgagctgactaagttatggaacgtttaccctagcaaccta
gaagcttgtgcagcagaagacaggatatttctccctcaagttgaagaattcttccaggat
gccatagatcaggctgaccctgaggctatgatagaaccagaatacaaagtggtaaacaac
agtaactatgcctggcaggccatacgtctcctagccaaacgcagccctcatttcttccag
acggtgacggccaccaaccctcctctcaagacggtccccgggtaccttgaatatatggtc
accaagatcgccaaagagttaccccaaaatgaggagagtaaaccggaagaactgaaaaca
gaggaagagacgactgaaaatgatgagctcttgaagggcccagaagaaggtatggacaaa
tccccttctgctgctgtcaccgaggagcagttcacacttgtggcctccaagattggggac
agctggcagacgctggcggtcgagctcggcttcagtgacgacgaggtgaccgccatcctc
tccgagacgtccgacatcaaggaacagaccaagctgatgctgcagcagtggcaggacaaa
gagggcgccgagccgtcgcgggagacgctcatcgcgggactgatggagagcgggctggac
gacatcgtggagtcggtgttcatggagaaacagaagaaagtggagttggtgttcgaggag
aaacagaagagagtagttgagaacggtgaaggaattgttgcagagtcagaaccaatggag
atggactcgtag
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