Strongylocentrotus purpuratus (purple sea urchin): 592385
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Entry
592385 CDS
T01019
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu04140
Autophagy - animal
spu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
592385
04148 Efferocytosis
592385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spu04131
]
592385
Membrane trafficking [BR:
spu04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
592385
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
WD40
Vps39_2
Vps39_1
ANAPC4_WD40
BUD22
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
592385
NCBI-ProteinID:
XP_030845913
LinkDB
All DBs
Position
Unknown
AA seq
894 aa
AA seq
DB search
MDGGGVTEVQEQLGALSMPRDERTNDERPEKRLEEEEEEEDDDEDDDEDDDDEDDDDDDE
NEEEADEPKLKYERISNTLEDILNTDAASFLAVHIKFLAIGTHWGVLHVLDHQGNNISGK
EFTKHTTTVNQVSMDMNGDYLASCSDDGRVAIIGLYEGEHNQVQSFDRPVKAVALDPKFS
RPGSGKQFITGSDRLVLHEKGFLGRSKSTILHHGEGPIRSIKWRASLVAWANDLGVKVYD
MQSKRRITFIKRDHPEAMRPELYRCNLCWKDDNTLLIGWANTIKICSVKERITPDNKDLP
SKYVEITSMFSTDFTVCGLAPLGDALVVVAFVTSGPKNDGEDNGARRPQLKIITPFSDDY
QLVTSDALSMRGFQSYRPNDYHLEYESDEGVFYIVSPKDVVVARQRDMDDHITWLMNQEK
YEEALSEARLNHKDLVKIRPMDVGHKYLNHLISTGEFDKAASLCPMILGKNKDLWEEEVF
KFAKLHKLKVISQYIPKGDMRLSKAIYEMILNEYLQTDLQGFNKLIKEWPHDLYDLMTVV
SAVMDRLNMDPRNAVLMQTLGELFIYDQRYDKALAIYLELGHEDVFKLIHKRNLFDSIQD
KIVLLMKFDTAQAIEMLITNSDKVAVKKVVSQLQDHRQLLYQYLDALFQKDPNEGKDFHA
MQVELYAEFDRPRLLPFLKTSNFYPLQQALEQCEQRNFIKEMVFLLGRMGNTKQALRLIT
EELKDVEQAIIFAKEHDDVELWGDLIDYSMDKPPFITGLLNNIGTHVDPIILIKRIKEGM
EIPGLRDSLVKILHDYNLQIMLREGCKKILVSDCFSLMQRLNKIQKRGVRIGDVQTCDCC
HQPLQNTEPPPVAVVFYCHHTFHEECILSQNMSHCLICHSQRRGPGSIASGFMR
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggatggaggaggtgtgacagaggtccaggagcagcttggtgctctatccatgcccaga
gatgaaaggacaaatgatgagagaccggagaaaagactagaagaggaggaggaggaggaa
gatgatgatgaggatgatgatgaggacgatgatgatgaggacgatgatgatgatgatgaa
aatgaggaggaagcagatgaacctaaactcaagtatgagagaataagcaacacactggag
gatatccttaacactgatgcagccagcttcttggctgttcatataaagtttcttgctatt
ggtacacattggggagtgcttcatgttttggatcaccaaggcaacaacatcagtgggaaa
gaattcactaagcacaccaccacagtaaaccaggtcagtatggatatgaatggggattac
ctggccagctgttcagatgatggcagggttgctatcattggcttgtatgaaggagaacac
aaccaagtccagtcttttgacaggccagtcaaggctgtagctcttgatccaaagttttct
cgtccaggcagcggcaagcagttcatcacaggaagtgatcggcttgtgcttcatgagaaa
ggattcttggggcgtagtaagtccaccattctccatcacggtgagggtcctattagaagt
atcaaatggagagcttctttggtagcatgggccaatgacttgggagtgaaggtatatgac
atgcagtccaagcgacgtatcacattcatcaagcgggatcacccagaggcaatgagaccg
gagctctatagatgtaatctctgttggaaggatgataatactctactcattggatgggca
aacactatcaagatttgctctgtgaaggagaggataaccccagacaacaaggatttacca
agcaaatatgttgaaataacttccatgttttccactgatttcactgtatgcggactggct
ccgctcggtgatgctctggttgttgttgcctttgtcacgagtggaccaaagaatgatggt
gaagacaatggagctcgtagaccacagttaaagatcataacccctttctccgatgattac
cagcttgttaccagtgatgccctgtcaatgcgtggtttccagtcctacaggcccaatgac
taccacttagagtatgaatcagatgaaggagtgttctatatcgtcagtccaaaggatgta
gtggttgctaggcaacgtgatatggatgatcacatcacatggttgatgaaccaagagaag
tatgaggaagcattgtctgaggctcgtctgaatcacaaagacctggtcaagattcgacct
atggacgtaggtcacaaatatctcaatcacctcatcagcactggggagtttgataaagct
gcaagcttgtgtccgatgatccttgggaagaacaaagatctttgggaggaggaggtgttc
aagtttgccaagcttcacaagctgaaggtcatcagtcagtacatacccaagggtgacatg
agactgtcaaaggccatctatgagatgatcctcaatgagtatctacagacagaccttcag
ggcttcaacaaactaatcaaggagtggccacatgacctctacgacctcatgacggtggtc
tcagccgtcatggatcgactcaatatggacccaaggaacgctgtcctgatgcagacactg
ggggagctgttcatctatgatcaacgttacgacaaggctctggccatttacctggagtta
gggcacgaggatgtgttcaagttgattcacaagcgcaacctctttgactcaatccaggat
aagatcgttcttttgatgaagtttgatactgctcaagccatcgagatgctcatcacaaac
tcagataaagtagctgtcaagaaagtggtatcacaactgcaagaccatcggcagctattg
tatcagtacctagacgccttattccagaaggaccccaacgaaggcaaagacttccatgcc
atgcaggttgagctttacgctgagtttgaccgaccacgccttcttccgttcctcaagacc
agtaacttctacccgttacagcaggccctggagcaatgcgaacagaggaacttcatcaag
gagatggtctttctgctcggtcgtatgggcaataccaagcaagctctgagattgatcaca
gaggagttgaaggatgttgaacaagcaatcatctttgccaaggagcatgatgatgtggag
ctgtggggcgacctcattgattattccatggacaaaccgccttttatcactggactcctg
aacaatattggaactcatgttgatccaattatactaattaagaggattaaggaaggaatg
gagattccgggtctaagggactcgctggtcaagattctgcatgactacaacttacagatc
atgttgagagaaggatgcaagaagattctggtgtcagattgtttctcactgatgcagagg
ctcaacaaaattcagaagagaggggtcagaattggtgatgttcagacatgtgattgctgt
caccaacctcttcagaacactgagcctcctccagttgcagtagttttctactgtcatcat
acattccatgaagagtgcatactctctcaaaacatgtctcattgcctgatctgtcattct
caacggcgaggaccaggaagcatcgcctctggatttatgagatga
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