Sphingomonas radiodurans: LLW23_02880
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Entry
LLW23_02880 CDS
T08717
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
srad
Sphingomonas radiodurans
Pathway
srad01501
beta-Lactam resistance
srad01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
srad00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LLW23_02880
01503 Cationic antimicrobial peptide (CAMP) resistance
LLW23_02880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srad02000
]
LLW23_02880
01504 Antimicrobial resistance genes [BR:
srad01504
]
LLW23_02880
Transporters [BR:
srad02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LLW23_02880
Antimicrobial resistance genes [BR:
srad01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LLW23_02880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
LPD37
Motif
Other DBs
NCBI-ProteinID:
WBH18203
LinkDB
All DBs
Position
596509..599685
Genome browser
AA seq
1058 aa
AA seq
DB search
MMAGVGAILALPIAQYPDVAPPQVSIRATYPGANAETIENSVTQILEQQLTGIDGLLYFA
SSSTSRGSVSITATFAKGTDPDIAQVQVQNQIQAALTRLPAQVQQQGVVVRKSNPDFLLI
AGVYDASDKMTNRDVSDLMVSTLQDSLGRVEGVGDTNVFGSQYAMRIWLDPAKLASFQLM
PGDVVSAIQTQNTEVAAGEIGGQPMPSEQMLNATVTAQARLQTPQQFRDIILKTAASGAT
VRVGDVARVELGSENYNASSRINGHPGAGIAVLLAPGADALKTAELVKAEIARIAKTYPS
NMRVAYSNDTTAFIKLSIEEVVKTLIEAIILVVIVMFVFLQSWRATLIPTIAVPVVLLGT
FAIFYFAGFSINTLTLFGLVLAIGLLVDDAIVVVENVERLMEENPDMSPREATIQSMDEI
TVALVAIALVLSAVFLPMAFFGGSTGVIYRQFSITIISAMMLSVAVAVILSPALTAHLLK
QHSAEEREKRAAGGGRFAWLKVRATRAGDWFNRNFERGTERYVTAVRRVVDRKWLFLLVY
LGIVGLLSVLFLRLPTGFLPTEDQGAALVQYRLPAGATIGRTAEVQLQLEQYFQRYEKNN
IGTMLTVSGGGGGGASGQNTGQGFIQLRDWAEREGKENAADAIVARAAGAFRALRDAQVF
ALIPPAIRGLGQSEGFTMELQNTGGLSQQQFAAARDKLLALANGDSQLTGVRLSELPDIG
TLQVKTDAQRIAALGVSQTDVNTTLSTAWGGRYVNDFIDRGRVKRVFVQGDAEYRDSPDT
LYQWFVRGSNGQMAPFSSFATTAWSQAPTTVSRFNGIASFEFQGQSVGGSSGDAMARIEE
LASQIPGTSIAWAGISYQERLSSGQAPLLYGLSIIVVFLCLAALYESWTIPLAVLLVIPT
GLIGAILFVTLRGLTNDVYLQIGLLTTMGLAAKNAILMIEFAEQEEKKGARVIDAALTAA
RIRLRPILMTSLAFIFGVLPLAISTGAGANSRIAIGTAVIGGMLTATVLAVFYIPLFFVL
VRRGFRDGMAKLRGREPGFHPPEVNQGPPNNPPRLEQS
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgatggccggggtcggcgcgatcctggccctgccaatcgcgcaatatcccgacgtggcg
ccaccgcaggtgtcgatccgcgcgacctatcctggcgccaacgccgaaacgatcgagaat
tcggtcacgcagatcctcgaacagcagctgaccggcatcgacggactgctgtatttcgcc
tcctcctccacctcacgcggctcggtttcgattactgcgacttttgccaagggtaccgat
ccggacattgcgcaggttcaggtacagaatcagatccaggcagcactcactcgcttgccg
gcgcaggttcagcagcagggcgtcgtggttcgcaaatcgaatccggacttcctgctgatc
gccggcgtctatgacgcgtcggacaagatgacgaaccgcgacgtatcggacctgatggtt
tcgacgttgcaggattcgctcggccgcgtcgaaggggttggcgacaccaacgtcttcgga
tcgcaatatgcgatgcgcatctggctagaccctgcgaagctcgcgagctttcagctgatg
cccggcgacgtggtctccgccattcagacgcagaataccgaggtcgcggcgggcgagatc
ggtgggcagccgatgccgagcgagcaaatgctgaacgcgaccgtcaccgcgcaggcgcgg
cttcagacgccgcagcagttccgcgacatcattttgaaaacggcggcatcgggcgccacc
gtgcgcgtcggcgatgtggcccgcgtcgagcttggctcggagaattacaacgcgagcagc
cggatcaacggccaccccggcgcaggcatcgcggtactgctcgcgccgggcgcggacgcg
ctcaagacggccgagttggtgaaagcggaaatcgcgcgcatcgcgaaaacctacccttcg
aacatgcgcgtcgcgtactcgaacgacaccaccgccttcatcaagctgtcgatcgaagaa
gtggtgaagacgctgatcgaagcgatcattctggtcgtcatcgtcatgttcgtcttcctg
caaagctggcgcgcgacgctgatcccgaccatcgcggtgccggtggtgctgctcggcacg
tttgccatattctatttcgccggattctcgatcaacacgctgaccctgttcgggctggtg
ctcgcgatcgggctgctcgtcgacgacgcgattgtggtggtcgagaatgtcgagcggctg
atggaggaaaatccggatatgtcgccgcgcgaggcgacgatccagtcgatggatgagatc
accgtggcactggtcgccatagcgctggtgctctcggcggtattcctgccaatggcattc
ttcggcggatcgaccggcgtgatttaccgccagttttcgatcacgatcatttcggcgatg
atgctgtcggtcgcggtggcggtgatcctgtcgccggcgctgactgcgcatctgctgaag
cagcatagcgccgaggaacgggagaagcgcgctgcaggcgggggacgttttgcctggcta
aaagttcgggcgactcgcgcgggcgactggttcaaccgcaatttcgagcgcggcaccgaa
cgctatgtcaccgccgtacggcgtgtcgtcgatcgcaagtggcttttcctgctggtgtac
ctcgggatcgtcgggttgctttcggtgctgttcctgcggctgccgaccggcttcctgccc
accgaggatcagggcgcagcgctcgtacagtatcgcttgcccgccggcgccacgattggc
cgaacggcggaggtgcagcttcagctcgagcagtatttccagcgctacgagaaaaacaat
atcggaacgatgctcaccgtgtcgggcggcggcggtggcggcgccagtggtcagaatact
ggccaggggttcatccagctccgagactgggccgaacgcgagggcaaggagaatgccgcc
gacgcgatcgtcgcgcgcgctgcgggcgcctttcgcgccttacgagatgcgcaggtcttt
gcgctgatcccgccggcgatccgcggtcttggccagtccgaaggcttcacgatggagctg
cagaatactggagggctaagccagcagcagttcgccgcggcgcgcgacaagttgttggca
ctggcgaacggcgattcccagctgactggggttcgcttgtcggaactccccgacattggt
acgctccaggtgaagactgatgcgcagcggatcgctgcgctcggcgtgtcgcagaccgat
gtgaacacgacgctgtcgacagcctggggcggccgctacgtcaacgatttcatcgaccgc
gggcgcgtgaagcgagtcttcgtgcaaggcgacgcggagtatcgcgacagccccgacacg
ctctatcaatggttcgtgcgcggatcgaacgggcagatggcgccgttttcgagcttcgcg
acgacggcatggtcgcaagcaccgacgacggtgtcgcggttcaacggaatcgcctcgttc
gaattccaggggcagagcgtcggcggcagctcgggcgatgcgatggcgcggatcgaggag
ctggcgagccagatccccggcaccagcatcgcctgggcgggcatttcgtatcaggagcgg
ctgtcatccggccaggcgcccttgctgtatggcctgtcgatcatcgtcgtctttctgtgt
cttgccgctttgtatgagagctggactatcccgctcgcggtgctgctggtcattcccaca
ggattgatcggcgcgatcctcttcgtcacgctgcgtgggctgaccaacgacgtctacctc
cagatcgggctgctgacgacgatggggctggcggcaaagaatgcgatcctgatgatcgaa
ttcgccgagcaggaagagaaaaagggcgcacgcgtcatcgatgccgcgctgaccgcggcg
cgcatccggctgcggccgatcctgatgacgagcctcgccttcatcttcggcgtgctgccg
ttggcaatttccaccggcgccggggcgaacagccgcatcgcgatcggaaccgcggtgatc
ggcgggatgctgaccgcgacggtgctggcggtgttctatattcccttgttcttcgtgctg
gtgcgccgcgggttccgcgacggcatggcgaagttgcgcgggcgtgagcctggcttccac
ccaccagaggtcaatcaaggcccaccgaacaatccgccacggctggagcaatcgtga
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