Sphingomonas radiodurans: LLW23_11440
Help
Entry
LLW23_11440 CDS
T08717
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
srad
Sphingomonas radiodurans
Pathway
srad03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
srad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LLW23_11440 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srad03400
]
LLW23_11440 (uvrB)
DNA repair and recombination proteins [BR:
srad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LLW23_11440 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LLW23_11440 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
DUF87
Kinesin
AAA_22
SWI2_SNF2
AAA_16
AAA_33
Microtub_bd
SRP54
Motif
Other DBs
NCBI-ProteinID:
WBH15447
LinkDB
All DBs
Position
2457286..2459478
Genome browser
AA seq
730 aa
AA seq
DB search
MAIPIRTTLSEPETGESFVPHRPQRPQKAEGGRPFKLVSDYEPAGDQPRAIGELVEAALA
GDKDQVLLGVTGSGKTFTMAKVIEQLQRPALILAPNKILAAQLYGEFKSFFPENAVEYFV
SYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRSLLERDDVIIVASVSCIYGIGS
VETYSAMIFDLKKGQTVDQREIVRKLVALQYKRNDAGFQRGNFRVKGDTLEIFASHLEDA
AWRISFFGDEIEEIVEFDPLTGRKAASMNSVRVYANSHYVTPGPTMKQATEAIRHELTER
LKEMEAEGKLLEHQRLEQRTNFDLEMIAATGSCNGIENYSRFLTGRLPGEPPPTLFEYLP
ENALLFVDESHQTVPQIGAMARGDHRRKITLAEYGFRLPSCIDNRPLRFNEWDAMRPQTV
SVSATPGHWEMEQTGGVFAEQVIRPTGLIDPPVEIRPVEEQVQDCIVECRKVAAQGYRTL
VTTLTKRMAEDLTEYMHEAGVRVRYMHSDVETLERIELIRDLRLGVYDVLIGINLLREGL
DIPECGLVCILDADKEGFLRSETSLIQTIGRAARNIDGRVILYADRITGSMERAMNETAR
RREKQEAYNAEHGITPVSIRKNIGDIIAHVASKDQVTVEIDDERPHMVGHNLRAYIEELE
KQMRKAASDLEFETAGRLRDEIRALEQEELGLPVSEHKAPQMGRSNEGKPGTRKTRYGKQ
QQVRMNKRAR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcccgatccgtacgaccctgtccgagcccgagaccggcgaatccttcgtgccg
catcggccgcagcgaccgcagaaggcggagggcgggcggccgttcaagctggtgtcggat
tacgagccagctggagaccagccgcgcgcgatcggggaactggtcgaggcggcgctggcg
ggggacaaggatcaggtgctgctcggcgtaaccgggtcgggcaagaccttcacgatggcc
aaggtgatcgagcaattgcagcgcccggcgctgatcctcgcgccgaacaagatcctcgcg
gcgcagctatacggcgagttcaagtcgttcttcccagagaatgcggtcgagtatttcgtc
agttactacgattactatcagcccgaggcctatgtgccgcggtcggatacgtacatcgag
aaggaaagctcggtgaacgaggcgatcgaccggatgcgccattcggcgacgcggtctttg
ctggagcgcgacgacgtgatcatcgtcgcgtcggtctcgtgcatctacggcattgggtcg
gtcgagacctactccgcaatgatcttcgacttgaagaaggggcagaccgtcgaccagcgc
gagatcgtgcgcaagctggtcgcgttgcagtacaagcgcaacgacgccgggttccagcgt
ggcaatttccgcgtgaagggcgacacgctcgagatcttcgcgagccacctcgaggatgcg
gcgtggcggatcagcttcttcggcgacgagatcgaggagatcgtcgaattcgatccgctg
accggcaggaaggcggcgagcatgaactcggtgcgcgtctatgcgaactcgcactatgtg
acgccggggccgacgatgaagcaggcgaccgaggcgatccgccacgagttgaccgagcgg
ctcaaggagatggaagcggagggcaagctgctcgagcaccagcggctggagcagcgcacc
aatttcgacctcgagatgatcgcggcgacgggcagctgcaacgggatcgagaattacagc
cgcttcctgaccgggcgactgccgggcgagccaccgccgacgttgttcgaatatctgccc
gagaatgcgttgctgttcgtcgacgagagtcaccagacggtgccgcagatcggcgcgatg
gcgcgcggcgatcaccggcggaagattacgctggcggaatacggattccgcttgccgagc
tgtatcgacaaccggccgctgcgcttcaacgagtgggatgcgatgcgcccgcagacagtc
agcgtctcggcgacgccggggcattgggagatggagcagaccggcggcgtgtttgccgaa
caggtgatccgcccgacggggctgatcgatccgccggtcgagatccgcccggtcgaggag
caagtgcaggattgtatcgtcgaatgccgcaaggtggcggcgcagggctatcgcactctc
gtgacgacgctgaccaagcggatggcggaggatttgaccgagtatatgcacgaggcggga
gtgcgcgtccgctatatgcactccgacgtcgagacgctggagcggatcgagctgatccgc
gaccttcggctgggcgtgtacgacgtgctgatcggcatcaacctgctgcgcgagggactt
gatattcccgagtgcggactggtgtgcatcctcgatgccgacaaggaaggtttcctccgc
tcggagacatcgctgatccagacgatcggccgcgcggcgcgcaatatcgacgggcgcgtg
atcctgtatgccgatcgtatcacgggctcgatggagcgcgcgatgaacgagacggcgcgc
cggcgcgagaagcaagaggcgtataacgccgaacacggcatcacgccggtgtcgatccgc
aagaacatcggggacatcatcgcccacgtcgcgtcgaaggatcaggtgacggtcgagatc
gacgacgagcggccgcacatggttgggcataacctgcgcgcgtatatcgaggagctcgag
aaacagatgcgcaaggctgcgtccgatctcgagttcgagaccgcgggacggttgcgtgat
gaaatccgggcgctggagcaggaggagcttgggttgccggtgagcgagcacaaggcgccg
cagatgggacgcagcaacgagggcaagccgggcacacgcaagacgcgctatggaaagcag
cagcaggtgcggatgaacaagcgggcgcggtag
DBGET
integrated database retrieval system
