Candidate division SR1 bacterium RAAC1_SR1_1: P148_SR1C001G0161
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Entry
P148_SR1C001G0161 CDS
T02946
Name
(GenBank) hypothetical protein
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
srb
Candidate division SR1 bacterium RAAC1_SR1_1
Pathway
srb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P148_SR1C001G0161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srb03019
]
P148_SR1C001G0161
03016 Transfer RNA biogenesis [BR:
srb03016
]
P148_SR1C001G0161
Enzymes [BR:
srb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
P148_SR1C001G0161
Messenger RNA biogenesis [BR:
srb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P148_SR1C001G0161
Transfer RNA biogenesis [BR:
srb03016
]
Prokaryotic type
tRNA degradation factors
P148_SR1C001G0161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
Motif
Other DBs
NCBI-ProteinID:
AHB40971
UniProt:
A0A288DF36
LinkDB
All DBs
Position
164532..166667
Genome browser
AA seq
711 aa
AA seq
DB search
MSIKRKEVKVIAKSFDRAGKSLSFETGKLAVQADCSLKIDLGDNQLLCSTVMEKNPRSDM
DFLPLMIDFRDSYSAVGRLGGAAYRRREGRPSDQAVLYSRLVDRALRPMFPKGMINDVII
TISPLGVAQDIDLGVMSIVGSSLSIMVAGIPFDGPVGAAQVGYIDGQYIINPTKEQLKTS
LLNLLVSGKKGSINMIECEGNEIPEEILKQAFVEGQKAIDESCDAQAAYLKLCTVEPKKI
VYNKPSDEVIAYVSNILTADKLSAMTGNAKVGFNELFSKYEKEAIEIAKENIENNDLEDF
TESKVKMAVFYVIKHFLRHRTLETGKRIDDRDIKEIRTLYCEVGLFPRTHGTGLFRRGDT
QVLSTVTLGGPGEYLIIDDMENDYVKQRYMHHYNFPPFSVGDAKAIRGTGRREIGHGRLA
EKAIEPMLPAKEDFPYTIRVVSDCLGSGGSTSMGSVCGSTLSLMDAGVPLKKPVAGIAMG
LMTEHEEDGTITKHMVLNDLMATEDFMGDMDFKVAGTKEGVTAIQLDTKLKGITMDIVHE
TITRACEGYKEIMDFMLETIPAPRTAVGTYAPKIFTMKISPDKIKEVIGKGGDVINKIIE
VSGGVKIDLSDDGMCFITHQDQLAIDKAVEMIKEIITDLEIGQTFDAKITRVEEYGIFVQ
LPKKKMGLCHVSQLGQKFTPPLTNHFKIGTTLKVTITGIDPTGKIGCKITA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtcaataaaaagaaaagaggtgaaagtgatcgctaaatcttttgatcgagcaggaaaa
tcgctttcatttgagacaggaaaattagcggtacaagctgattgttctctcaaaatcgat
ttaggagacaatcaattgttatgttctacggttatggaaaagaatccaagatctgatatg
gattttttgccattgatgattgattttagagatagttattctgcagtaggaagacttggt
ggtgcagcatacagaagaagagaatgaagaccttctgatcaagcagttctttactcaaga
cttgtagatagagcacttagaccaatgtttccaaaggggatgatcaatgatgtaattatc
actatttctccacttggagtagctcaagatatagatcttggtgtaatgtctattgtagga
tcttcattatcaattatggtagcaggaattccttttgatggtccagtaggagcggctcaa
gtaggatatattgatggtcaatatatcatcaatccaacaaaagaacaattaaaaacgtca
cttctcaatcttctcgtttcaggtaaaaaaggatcaatcaatatgatcgaatgtgaagga
aacgaaataccagaagaaattcttaaacaagcatttgttgaaggacaaaaagcaattgac
gaatcttgtgatgcacaagcagcgtatcttaaattatgtacggttgaacctaaaaaaata
gtatataacaaaccatcagacgaagttatcgcctatgtttcaaatattcttactgctgat
aaactttcagctatgacaggaaacgcaaaagtaggattcaacgaattatttagcaaatat
gaaaaagaagctatcgaaatagcaaaagaaaatattgaaaataacgatctcgaagatttc
acagaaagtaaggtaaagatggcagtcttttacgttatcaaacatttccttcgccatcgt
acattagagacaggaaagagaattgacgatagagatatcaaagaaattagaacactatat
tgtgaagtaggattgtttccaagaactcatggaactggtttgttccgaagaggggatacg
caagtactaagtaccgttactctaggaggtcctggagaataccttattatcgatgatatg
gaaaatgattatgtgaaacaaagatatatgcatcattacaatttccctccattttcagtg
ggagatgcaaaagctattagaggaacaggtcgtagagaaattggacatggaagattagca
gaaaaagctatcgaacctatgcttccagcaaaagaagacttcccatacactatcagagtt
gtttctgattgtctaggatcaggaggttctacatcaatgggatcagtttgtggatcaaca
ctttcattaatggatgctggagtacctttgaaaaaaccagttgcaggaattgcaatggga
ttgatgacagaacatgaagaagacggaacaatcactaaacatatggtgcttaatgatctt
atggcaacagaagattttatgggagatatggatttcaaagtagcaggaacaaaagaagga
gtaacagctatccaacttgataccaaactcaagggaattactatggatatcgttcatgaa
actatcacaagagcatgcgaaggatacaaagaaattatggattttatgcttgaaactatc
cctgcaccaagaactgcagttggtacctatgcaccaaagatcttcacgatgaaaattagc
ccagataagatcaaagaagtgatcggaaaatgaggtgatgtgatcaacaagattatcgaa
gtttctggttgagtaaaaatcgatctttcagatgatggaatgtgttttatcacgcatcaa
gatcaattagctatcgacaaggcagttgagatgatcaaagaaatcattactgatcttgaa
attggacaaacgtttgacgcaaaaatcacaagagtagaggaatatggtattttcgttcaa
cttccaaagaagaagatgggactttgtcatgtctctcaacttggacaaaaattcacccct
ccattgacgaatcatttcaaaataggaacaactcttaaagttactatcacatgaatcgat
cctacaggtaagatttgatgtaaaataacagcttaa
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