Streptomyces rapamycinicus: M271_20650
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Entry
M271_20650 CDS
T02907
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
src
Streptomyces rapamycinicus
Pathway
src03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
src00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
M271_20650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
src03400
]
M271_20650
DNA repair and recombination proteins [BR:
src03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
M271_20650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF5423
Gag_p12
DUF4604
Motif
Other DBs
NCBI-ProteinID:
AGP55674
LinkDB
All DBs
Position
5165338..5166405
Genome browser
AA seq
355 aa
AA seq
DB search
MSIPIKIYPATEDHSISFRQIHTSDNGRIRYRKVCELEDKPVESSEIGRAYEDADGALVP
ITEEDLAALPLPTTHTLEIEAFISASEIDPLQMGDAYYLGTSGAAGAKPYTLLREALKRS
EKVAIAKYAHRGRERLGMLRVVGDTIALHRLLWPDEVREPAGVAPKEKVTVKPAELDLAD
TLMETLGEVDLNDLRDEYHEALEELVAAKVSGATPTAEPGERPAGAQVVDLMAALKESVR
SAKEARGEEAGEEAETAEGEAGEEPEATVHELRGRKKAPAKKAAAAKKAPAAEKKTAAKR
GGTKTAKAAKAAEAAEAEPAGKKQAGTKKAAAKKTAAKKATAKKQPGKRGTRTAS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
gtgagcattccgatcaagatctatccggccaccgaggaccactcgatctcgttccggcag
atccacaccagcgacaacggccgcatccgctaccgcaaggtctgcgagctcgaggacaaa
ccggtggagtcgagcgagatcgggcgggcgtacgaggacgcggacggcgcactggtcccg
atcaccgaggaggatctcgcggcccttccgctgcccaccacccacaccctggagatcgag
gcgttcatctccgcctccgagatcgatccgctccagatgggcgacgcctactacctgggc
accagcggcgccgccggggccaagccgtacaccctgctgcgcgaggcgctcaagcgcagc
gagaaggtcgccatcgccaaatacgcccaccgcggccgcgagcggctggggatgctccgc
gtcgtgggcgacacgatcgcgctgcaccggctgctctggccggacgaggtgcgcgagccc
gcgggggtggcccccaaggagaaggtcaccgtgaaaccggctgaactggacctcgcggac
accctgatggagacgctcggagaggtggatctgaacgatctgcgcgacgagtaccacgag
gcgcttgaggaactggtggcggcgaaggtgtccggcgccacgcccaccgccgagcccggt
gagcggcccgcgggcgcgcaggtggtcgacctcatggcggcgctgaaggagagcgtccgc
agcgccaaggaggcccggggcgaggaggccggggaggaggcggagaccgcggagggcgaa
gccggggaggagccggaggcgacggtccacgagctgcgcggccgtaagaaggcaccggcg
aagaaggccgcggcggcgaagaaggcgcccgcggccgagaagaagacggcggcgaagaga
ggcgggacgaagacggcgaaggccgccaaggccgcggaggccgcggaggcggagcctgcg
gggaagaagcaggcgggcacgaagaaggccgcggccaagaagacggcggccaagaaggcc
accgcgaagaagcagccgggcaagcgcggcacgcggaccgcctcctga
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