Salpingoeca rosetta: PTSG_01653
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Entry
PTSG_01653 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
sre
Salpingoeca rosetta
Pathway
sre03022
Basal transcription factors
sre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PTSG_01653
09124 Replication and repair
03420 Nucleotide excision repair
PTSG_01653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sre03021
]
PTSG_01653
03400 DNA repair and recombination proteins [BR:
sre03400
]
PTSG_01653
Transcription machinery [BR:
sre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PTSG_01653
DNA repair and recombination proteins [BR:
sre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PTSG_01653
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
DZR
zinc_ribbon_15
C1_2
zinc_ribbon_2
IBR
DZR_2
C1_1
Zn_ribbon_SprT
Motif
Other DBs
NCBI-GeneID:
16078226
NCBI-ProteinID:
XP_004997631
UniProt:
F2TYK0
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MADRIEAGVEYVWDEVREGEDGTLCIDEITAQTHTRVRKRHALAPQLGPCKRGMIRHVYL
VVDLSQDMDDDDLKPNRLTCTVHNLIDFVHSFFHENPISDMGVIVMREGVARVICELNGN
KDVLVEHLSALLHPKTPLFPAGEASLQNALAVARRSLRSIPSHATREVVIVQATLASCDP
GNILDTIKSLRSDKVTVNVVGLAAAVRICETVCKETGGIHAVALDEDHLGELLLALTTPP
AAPADADATQMRLGFAAYEGRRPTVRRQKDGQLGITTGGYVCPQCRAKVSDIPQRCTTCG
LMLVSSPHLAKTFHHMFPLPVFKEVTLAAAEWCAGCTQPLPTTLPAYECPSCGARVCLDC
DVYVHRELHNCPGCPVTADSWTQHNTDQQRQQHT
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccggattgaggctggtgtggagtatgtgtgggatgaggtgcgggagggcgag
gacggcacgctatgcatcgatgagatcacggcacagacacacacgcgcgtccgcaagcga
catgcgctcgccccacaacttggaccatgcaaacgtggcatgatccgacacgtgtacttg
gtggtggatctgtcacaagacatggatgatgacgacctgaaaccaaacaggctgacgtgc
acggtgcacaacttgatcgactttgtgcactccttcttccacgagaatcccattagcgat
atgggcgtcatcgtcatgcgtgagggtgtcgctcgtgtcatctgcgaactcaacggcaat
aaggacgttctggttgagcacctctcagcgctgctgcacccgaagacgcccctcttcccc
gcaggcgaagcctcgctgcagaacgcccttgccgttgccagacgctccctcaggtccatc
ccaagtcacgccacacgcgaggtcgtcatcgtgcaggccacgctcgcatcctgcgatcca
ggcaacatcctcgacaccatcaagtctctgcgttcggataaggtgacggtgaatgtcgtt
gggctagctgccgccgttcgcatctgcgaaaccgtctgcaaggaaacaggaggcatccat
gctgtagcgctggacgaggatcatcttggcgaactgctgctcgcgctgacaacaccgccc
gccgcccctgccgacgccgacgcaacgcagatgcggcttgggtttgccgcgtacgagggc
aggcggcccacagtcaggcgccagaaggacggacagcttggcatcaccactggcggttat
gtgtgtccgcagtgccgggcgaaagtgtccgatattcctcagcgctgcaccacgtgcggc
ctcatgctcgtgtcgtcgccgcacctcgccaagaccttccatcacatgttcccgctcccg
gtgtttaaggaggtcacactcgcagcagcagagtggtgtgcgggctgcacgcaacccttg
cccacgacgctccctgcgtacgagtgcccatcctgcggcgcgcgcgtgtgtctcgattgt
gatgtgtatgtgcaccgcgagctgcacaactgcccgggctgccccgtcaccgcagactcg
tggacgcaacataacaccgaccagcaacgccaacaacacacctga
DBGET
integrated database retrieval system
