Salpingoeca rosetta: PTSG_02209
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Entry
PTSG_02209 CDS
T04136
Name
(RefSeq) XPA binding protein 1
KO
K24104
GPN-loop GTPase
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sre03021
]
PTSG_02209
Transcription machinery [BR:
sre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
PTSG_02209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP_bind_1
GTP_EFTU
AAA_16
AAA_22
AAA_19
NACHT
nSTAND1
AAA_28
AAA_33
PduV-EutP
FeoB_N
AAA_30
SAPIS-gp6
Roc
NB-ARC
Dynamin_N
GST_C_2
AAA_5
Motif
Other DBs
NCBI-GeneID:
16077290
NCBI-ProteinID:
XP_004996696
UniProt:
F2U1J0
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MATQQTSENAAKQQQEQEVPTAPMVGTTPCIICIGMAGSGKTSLVQRINAYLHQRHAGRQ
CSSATSAPGTEAKQAASTAQADTTAEAPTHAEATTEAETVDTTAEAMDTTASTEAPSGEA
STTPAAATADRTPCYVLNLDPAVYQLPYEANIDIRETINYKAVMKDYGLGPNGAIVTCLN
LFATKFDQVLSLMEKRSPTTDYFLFDTPGQIEVFTWSASGTIITETLGSSFPTVVVYAID
TPRCTSPVTFMSNMLYACSIMYKTRLPFIIVFNKVDVTSHEFAVEWMRDYETFRDIVSEE
TAYIGSMARSMGLVLEEFYHNLRAVGVSALTGAGMEDLFSAVDEAVNEYMTDFKPELDEL
LKKKEQEKIDRATESLTKLARDMKLGGKVVLDSRAPMGAGDGDDEDDVDSDDYDDLEDSA
RVVQVATKTNDAFQRSQGL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcagcaaacaagcgagaacgctgccaagcagcagcaggagcaggaggtgccc
acggcgcccatggttggcacaacgccgtgcatcatctgcatcggcatggctgggtcgggc
aagacgtcgctggtgcagcgaattaatgcctacttgcatcagcggcatgcggggcgacag
tgcagcagtgcaaccagtgcaccaggcacagaagccaaacaagcagcaagcacagcacag
gcagacacaacagcagaagcccccacacacgcagaagcgacaacagaagcagagacagta
gacacgacagcagaggcgatggatacaacagcctcaacagaggcaccaagtggtgaggcc
agtaccacgcctgcagcggctacagctgaccgtacgccgtgctatgtgctcaacctggat
ccggcggtgtatcagctcccgtacgaggcgaacattgacatccgggagaccatcaactac
aaggccgtgatgaaggattatggccttggtccaaacggcgccattgttacctgcctcaac
ctctttgccaccaagtttgaccaggtgctgtcgctcatggagaaacgcagtcccacgacg
gattatttcctgtttgacacgccgggacagattgaggtgttcacgtggtctgcgtccggc
accatcatcacggagacgcttgggtccagcttcccgacggttgtggtgtatgccattgac
acgccgcggtgcaccagcccggtcacattcatgtccaacatgctctacgcctgcagcatc
atgtacaagacgcggctccccttcatcattgtcttcaacaaggttgacgtgaccagccac
gagtttgcggtcgagtggatgcgcgactacgagaccttccgcgacattgtgtcggaggag
acggcgtacattggctccatggctcgctccatgggcctggtgctggaggagttttaccac
aacctgcgtgcggtgggcgtgtctgcgctcacgggcgcgggcatggaggacctcttctcc
gccgtggatgaggccgtcaacgagtacatgacagacttcaagccagagctggacgagctc
ctcaagaagaaggagcaagagaagattgaccgtgccacagagtccctgacgaagctggct
cgcgacatgaagctgggaggcaaggtggtcctcgactcacgagcaccgatgggggcaggg
gatggcgatgacgaggacgacgtggattcagacgattacgatgacctggaggacagcgct
cgcgtggtgcaagtggcgacaaagaccaacgacgcgttccagcgcagccaagggttgtga
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