KEGG   Salpingoeca rosetta: PTSG_02410
Entry
PTSG_02410        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K18758  DIS3-like exonuclease 2 [EC:3.1.13.-]
Organism
sre  Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:sre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sre03019]
    PTSG_02410
Messenger RNA biogenesis [BR:sre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PTSG_02410
SSDB
Motif
Pfam: RNB OB_Dis3 Dis3l2_C_term CSD2 Rrp44_S1 RNA_pol_3_Rpc31 Rrp44_CSD1
Other DBs
NCBI-GeneID: 16077493
NCBI-ProteinID: XP_004996901
UniProt: F2U245
LinkDB
Position
Unknown
AA seq 1023 aa
MGKRGQEKGEDTPKQLRKDLMRQYQQAKSAPKHPHPRGPRHKSTDWRADRHDEDEDQQQQ
QQQQQQGHGHRGPHGQHGRQQTYAPQPVPPGSSHHKHHEGGHHAAKSSPRRPRHEGKPQG
KHGKASPRTPRSQRSAGHAQRSDAPRWRSERDGGDDTKGSPRTPRSRGNRSNRGHGGNNG
STSRPNSSRSNRSTPSRGRNIFEPYLSPAEVEKRAARGELVIGRLRVNPKNYEDCYVKHS
AHYKRDISVPTMTARNRALDGDEVAVELLPRYCWRVMETEAERAAERTVKAGIPRRQQLS
PLRATRRAAADDDDVDGVTQQMSELKASEQRNGRANWTDYDDDDEEVEAVVEEKEQGSND
DDEDEEEEVKDLDDIDTDAVEKKGHEEDLSGPFMGPIEHRNDNIPDEFLLPIGRVRTHQA
MCYKYVRFNPRDPRVPRLLIPKDKAPQDFYQNTKAYAGKCYTARLVHWSEHSPLAIGELV
DVLGNAGAITVETESILQENGVPPAEFTEDVLACLPDVKEGDDWRIPQEELARRRDLRHE
RIFSVDPLTARDLDDALSCKKLDDGSFEVGVHIADVSFFIERGSALDKEAKRRATSTYMV
HGVYPMLPRLLCENLCSLVADVDRLAYSVIWRLDADGNKLDQWMGRTVIRSCGKLAYEHA
QAVIEDESVQWTGEDFPPISAPHTIDSVKRDIVHLDRLAKAMRRRRFAGGALSLNKGKVG
IRVDPDTQEPVEVYPYEIRDANRMIEDFMLLANMSVAQVISDTYPQCALLRRHPPPLQAR
LHTVRVVLCCVVLCCVTVLLASHLTTHLPNQPNHQPCTQPSLLQVHALAAMLARAMQLAE
YFSTGSEELTRQEWRHYALNAPVYTHFTSPIRRYADVIVHRLLTSALNGDIDPHYGHPQV
DDIADTCNVRKLAAKRAQESSVSLYTSAYLAAHGPVVAQAVVIEVMSYSVKLHVPKYGIE
HQANLKLLDLPLKYDERAGKLTVTWNDTTKQELMLFSHVNVQLTSHFKKQKYFDNVRILP
PPK
NT seq 3072 nt   +upstreamnt  +downstreamnt
atgggaaagcgcggacaagaaaagggtgaggatacacccaagcagctgcgcaaggatctg
atgcgccagtatcagcaagccaaaagcgcacccaagcaccctcaccctcgtggaccgagg
cataaatccacagattggcgggctgatcgacacgatgaggatgaagaccaacaacagcag
cagcagcaacagcagcaagggcatggccatcgcgggccccacggccagcatggacgacag
caaacgtacgcgccgcagcccgtgccaccgggaagcagccatcacaagcaccacgaaggt
ggacaccacgcagccaagtcctcgccgcgccgcccgcgccacgagggcaagccacaaggc
aagcacggcaaggcgtcgcctcgaaccccgcgcagccagcgctctgcaggacatgcgcag
cggtcggatgcaccgcgctggcgcagcgagcgggacggtggcgacgacaccaagggctcg
ccgcggacaccgcgtagccggggcaaccgcagcaaccgcggccatggcggaaacaacggc
agcaccagccgcccaaactcctccaggagcaaccgctccacgccttcgcgcggccgaaac
atcttcgagccatacctctccccggccgaagtggagaagcgcgctgcccgcggtgagctg
gtgattggccgcctccgcgtgaacccgaagaactacgaggactgctacgtcaagcacagc
gcgcactacaagcgggacatcagcgtgcccacaatgacggcacgcaacagggcgctggat
ggcgacgaggtggccgtggaactgctgccccgctactgctggcgcgtgatggagacagag
gctgagcgcgccgcggagcggactgtgaaggccggcattccgcggcggcagcagctgtcg
cccctgcgagcaacgcgccgtgctgctgctgatgatgatgatgttgatggggttacgcag
cagatgagcgaattgaaggcgtcagaacagcggaacggccgcgcaaactggaccgactat
gacgacgacgacgaagaggtggaggccgtggtggaagagaaagaacaaggctccaatgac
gatgatgaggatgaggaggaggaggtgaaggatttggatgacattgacacggatgctgtt
gagaagaaaggacacgaagaggacttgagtggtccgtttatgggtccaatcgagcacagg
aacgacaacatcccagacgagtttctccttcccatcggccgggtaagaactcaccaggca
atgtgctacaagtacgtgcgcttcaatccgcgcgatccgcgcgtgccacgtctgctcatt
cccaaggacaaggccccacaggacttctaccagaacacaaaggcgtatgcgggcaagtgt
tacacggctcgcctcgtgcactggtcggagcactcgccgcttgccattggcgagctggtg
gatgtgcttggcaacgcgggcgcaatcacggtggagacagagtccattctgcaagagaac
ggcgtgccgccagcagagtttacagaggacgtgcttgcctgtctgccggacgtgaaggaa
ggtgacgactggcgcattccacaggaagagcttgcgcgccggcgggatcttcgccacgaa
cgaatcttttctgtcgatcccctgacagccagggatcttgatgatgcgctctcgtgcaag
aagttggacgacgggtcgtttgaggttggcgtgcacatcgcagacgtcagcttcttcatt
gagcggggcagtgccctcgacaaggaagcgaagcggcgtgcgacgagcacgtacatggtg
cacggcgtgtacccgatgttgccgcgtcttctctgcgaaaacctgtgcagtctcgtggcc
gacgtggaccgcctcgcgtacagcgtcatctggcgcctcgatgccgacggtaacaagctc
gaccagtggatggggcgcacggtgattcgctcgtgcgggaagcttgcatacgagcacgcg
caggcggtgattgaggatgagagcgtgcagtggactggtgaggatttcccgcccatcagc
gccccacacaccatcgacagcgttaagcgcgacattgtgcatctcgacaggctggcgaag
gcgatgcggcggcggcgctttgctggcggcgctctctcgctgaacaagggcaaggtcggc
atcagggtcgatccagacacgcaggagcccgtcgaagtgtacccgtatgagattcgcgat
gcgaaccgcatgattgaggactttatgctgctggcaaacatgtctgttgctcaagtcatt
tcagacacatatccgcagtgcgcccttctacgccggcacccaccgcccctgcaggccagg
ctgcacacggttcgtgttgtgttgtgttgtgttgtgttgtgttgtgttacagtgttgctt
gcatctcacttgaccacccacctacccaaccaacccaatcaccaaccatgcacgcaaccg
tctctgctgcaggtgcacgcgctggcggcgatgctggcgcgggcaatgcagctggcagag
tacttcagcacaggcagcgaggagctgacgcggcaggagtggcgtcattacgccctcaac
gcgcccgtgtacacccacttcacatcgcccatccgccgctatgcggacgtgattgtgcac
cgactgctgacgtcggcgctcaacggcgatatcgacccccactacggtcatccacaggtg
gacgacattgcggacacgtgcaacgtccgcaagctcgctgcgaagcgtgcacaggagtcg
agcgtctcgctgtacacgtctgcctatctggcagcacacggccccgtcgttgcgcaggcg
gtggtgattgaggtcatgtcatactctgtcaagttgcatgtgccaaaatacggcattgag
caccaggcgaacctcaagctgcttgatcttcccctcaagtacgatgagcgcgctggcaaa
ctcacggtcacctggaacgacaccaccaagcaggagttgatgctgttttcgcacgtgaat
gtgcagttgacatcgcatttcaagaagcaaaagtactttgacaacgtgcgcatcctgcca
ccacccaagtga

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