Salpingoeca rosetta: PTSG_02410
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Entry
PTSG_02410 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K18758
DIS3-like exonuclease 2 [EC:3.1.13.-]
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sre03019
]
PTSG_02410
Messenger RNA biogenesis [BR:
sre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PTSG_02410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Dis3l2_C_term
CSD2
Rrp44_S1
RNA_pol_3_Rpc31
Rrp44_CSD1
Motif
Other DBs
NCBI-GeneID:
16077493
NCBI-ProteinID:
XP_004996901
UniProt:
F2U245
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MGKRGQEKGEDTPKQLRKDLMRQYQQAKSAPKHPHPRGPRHKSTDWRADRHDEDEDQQQQ
QQQQQQGHGHRGPHGQHGRQQTYAPQPVPPGSSHHKHHEGGHHAAKSSPRRPRHEGKPQG
KHGKASPRTPRSQRSAGHAQRSDAPRWRSERDGGDDTKGSPRTPRSRGNRSNRGHGGNNG
STSRPNSSRSNRSTPSRGRNIFEPYLSPAEVEKRAARGELVIGRLRVNPKNYEDCYVKHS
AHYKRDISVPTMTARNRALDGDEVAVELLPRYCWRVMETEAERAAERTVKAGIPRRQQLS
PLRATRRAAADDDDVDGVTQQMSELKASEQRNGRANWTDYDDDDEEVEAVVEEKEQGSND
DDEDEEEEVKDLDDIDTDAVEKKGHEEDLSGPFMGPIEHRNDNIPDEFLLPIGRVRTHQA
MCYKYVRFNPRDPRVPRLLIPKDKAPQDFYQNTKAYAGKCYTARLVHWSEHSPLAIGELV
DVLGNAGAITVETESILQENGVPPAEFTEDVLACLPDVKEGDDWRIPQEELARRRDLRHE
RIFSVDPLTARDLDDALSCKKLDDGSFEVGVHIADVSFFIERGSALDKEAKRRATSTYMV
HGVYPMLPRLLCENLCSLVADVDRLAYSVIWRLDADGNKLDQWMGRTVIRSCGKLAYEHA
QAVIEDESVQWTGEDFPPISAPHTIDSVKRDIVHLDRLAKAMRRRRFAGGALSLNKGKVG
IRVDPDTQEPVEVYPYEIRDANRMIEDFMLLANMSVAQVISDTYPQCALLRRHPPPLQAR
LHTVRVVLCCVVLCCVTVLLASHLTTHLPNQPNHQPCTQPSLLQVHALAAMLARAMQLAE
YFSTGSEELTRQEWRHYALNAPVYTHFTSPIRRYADVIVHRLLTSALNGDIDPHYGHPQV
DDIADTCNVRKLAAKRAQESSVSLYTSAYLAAHGPVVAQAVVIEVMSYSVKLHVPKYGIE
HQANLKLLDLPLKYDERAGKLTVTWNDTTKQELMLFSHVNVQLTSHFKKQKYFDNVRILP
PPK
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagcgcggacaagaaaagggtgaggatacacccaagcagctgcgcaaggatctg
atgcgccagtatcagcaagccaaaagcgcacccaagcaccctcaccctcgtggaccgagg
cataaatccacagattggcgggctgatcgacacgatgaggatgaagaccaacaacagcag
cagcagcaacagcagcaagggcatggccatcgcgggccccacggccagcatggacgacag
caaacgtacgcgccgcagcccgtgccaccgggaagcagccatcacaagcaccacgaaggt
ggacaccacgcagccaagtcctcgccgcgccgcccgcgccacgagggcaagccacaaggc
aagcacggcaaggcgtcgcctcgaaccccgcgcagccagcgctctgcaggacatgcgcag
cggtcggatgcaccgcgctggcgcagcgagcgggacggtggcgacgacaccaagggctcg
ccgcggacaccgcgtagccggggcaaccgcagcaaccgcggccatggcggaaacaacggc
agcaccagccgcccaaactcctccaggagcaaccgctccacgccttcgcgcggccgaaac
atcttcgagccatacctctccccggccgaagtggagaagcgcgctgcccgcggtgagctg
gtgattggccgcctccgcgtgaacccgaagaactacgaggactgctacgtcaagcacagc
gcgcactacaagcgggacatcagcgtgcccacaatgacggcacgcaacagggcgctggat
ggcgacgaggtggccgtggaactgctgccccgctactgctggcgcgtgatggagacagag
gctgagcgcgccgcggagcggactgtgaaggccggcattccgcggcggcagcagctgtcg
cccctgcgagcaacgcgccgtgctgctgctgatgatgatgatgttgatggggttacgcag
cagatgagcgaattgaaggcgtcagaacagcggaacggccgcgcaaactggaccgactat
gacgacgacgacgaagaggtggaggccgtggtggaagagaaagaacaaggctccaatgac
gatgatgaggatgaggaggaggaggtgaaggatttggatgacattgacacggatgctgtt
gagaagaaaggacacgaagaggacttgagtggtccgtttatgggtccaatcgagcacagg
aacgacaacatcccagacgagtttctccttcccatcggccgggtaagaactcaccaggca
atgtgctacaagtacgtgcgcttcaatccgcgcgatccgcgcgtgccacgtctgctcatt
cccaaggacaaggccccacaggacttctaccagaacacaaaggcgtatgcgggcaagtgt
tacacggctcgcctcgtgcactggtcggagcactcgccgcttgccattggcgagctggtg
gatgtgcttggcaacgcgggcgcaatcacggtggagacagagtccattctgcaagagaac
ggcgtgccgccagcagagtttacagaggacgtgcttgcctgtctgccggacgtgaaggaa
ggtgacgactggcgcattccacaggaagagcttgcgcgccggcgggatcttcgccacgaa
cgaatcttttctgtcgatcccctgacagccagggatcttgatgatgcgctctcgtgcaag
aagttggacgacgggtcgtttgaggttggcgtgcacatcgcagacgtcagcttcttcatt
gagcggggcagtgccctcgacaaggaagcgaagcggcgtgcgacgagcacgtacatggtg
cacggcgtgtacccgatgttgccgcgtcttctctgcgaaaacctgtgcagtctcgtggcc
gacgtggaccgcctcgcgtacagcgtcatctggcgcctcgatgccgacggtaacaagctc
gaccagtggatggggcgcacggtgattcgctcgtgcgggaagcttgcatacgagcacgcg
caggcggtgattgaggatgagagcgtgcagtggactggtgaggatttcccgcccatcagc
gccccacacaccatcgacagcgttaagcgcgacattgtgcatctcgacaggctggcgaag
gcgatgcggcggcggcgctttgctggcggcgctctctcgctgaacaagggcaaggtcggc
atcagggtcgatccagacacgcaggagcccgtcgaagtgtacccgtatgagattcgcgat
gcgaaccgcatgattgaggactttatgctgctggcaaacatgtctgttgctcaagtcatt
tcagacacatatccgcagtgcgcccttctacgccggcacccaccgcccctgcaggccagg
ctgcacacggttcgtgttgtgttgtgttgtgttgtgttgtgttgtgttacagtgttgctt
gcatctcacttgaccacccacctacccaaccaacccaatcaccaaccatgcacgcaaccg
tctctgctgcaggtgcacgcgctggcggcgatgctggcgcgggcaatgcagctggcagag
tacttcagcacaggcagcgaggagctgacgcggcaggagtggcgtcattacgccctcaac
gcgcccgtgtacacccacttcacatcgcccatccgccgctatgcggacgtgattgtgcac
cgactgctgacgtcggcgctcaacggcgatatcgacccccactacggtcatccacaggtg
gacgacattgcggacacgtgcaacgtccgcaagctcgctgcgaagcgtgcacaggagtcg
agcgtctcgctgtacacgtctgcctatctggcagcacacggccccgtcgttgcgcaggcg
gtggtgattgaggtcatgtcatactctgtcaagttgcatgtgccaaaatacggcattgag
caccaggcgaacctcaagctgcttgatcttcccctcaagtacgatgagcgcgctggcaaa
ctcacggtcacctggaacgacaccaccaagcaggagttgatgctgttttcgcacgtgaat
gtgcagttgacatcgcatttcaagaagcaaaagtactttgacaacgtgcgcatcctgcca
ccacccaagtga
DBGET
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