Salpingoeca rosetta: PTSG_05483
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Entry
PTSG_05483 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K20305
trafficking protein particle complex subunit 8
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sre04131
]
PTSG_05483
Membrane trafficking [BR:
sre04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
PTSG_05483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
TPR_12
SNAP
FAS_I_H
Motif
Other DBs
NCBI-GeneID:
16073930
NCBI-ProteinID:
XP_004993353
UniProt:
F2UBC4
LinkDB
All DBs
Position
Unknown
AA seq
1144 aa
AA seq
DB search
MAPTKELVQSLFAPNVLVLWTKEAEATCMQRGLSCKHLLAPFGRSRSQAPDVQFRTLDDL
RPLVVEDGIAQTKAAVTQHEGLCEDWNIGSGVAPWFNDYCHHFFSLMRPCDHEFFGHPLL
RIVLCTAKGDDPITSIASSLSSQKQRDAFSAFPYVSQDIPTCYLLLSDHHDDDATVTAFL
QRLSNDFGSKNCFHVPLQQAADGDEEQDVSDVWTTALPALASAAQSRPQSTTEEPTAPPV
DADPLSAMASMANADPERVGLAAGFCIADVQKLKDTCAAIVDTALVPAVRHHAQLLSAEV
TATRKSRSTFLNATRKWFSSGKSAQSGTGQDPYAPDSFEMQTRRLADLLFMIKEYDDAYQ
HYRHLRKDFNNDRSWKHLAGANEMLAACMLLDPRLDQGRYESRQLFESAMATYNKSGMPF
HTARVAITAAADFTARTQHADAAATFVRVVSEESDLRSAIFLEQAATCYFASPSSRRKAA
FHLVLAAFRFIKAHQRMHARRCYVQAEKLFSGLGWQHIEDHIHQSLARQCEQLGLLHKSI
DAYAHVLRECPGSARSHSDVLGTFMHLYRHLQESEDAASAPPPLPVPIVNKNIRVRLQLQ
ANTQAAHISQQEEKVAAFMNKPQVHQAAVLSDKTTNTSPATVVVEEPVGVEFQLTNPLAT
SLRLTALKLVCTLVDADGNECKPDQLELTEMVEIEMGAGEDVDVVLTAMPLTQGTLHVKG
IRYNIHLGQSEIAGQQPLLVRGKRLNSTHAERTACVYAPDKRLDLRVVSASPLFTYQSTP
LPAEVLRGQVVTVEVDVKNQGTAPTANVVCVFPEHAWKPHIELEDGTQLPAEGQCVDLSS
VVQLSPGDATRFRARFQVAPHAPDAFALCIGYRGQNPPQQLPYRMVTLSCRMRAAEGPAV
TATIIPTSATRALLRLVFSPVPKDVQLCECLLRNSHWMLDTSTIIADHALPPTPGATRVA
LLPCVPATSAPSALPPAVSLQVPTNSTGAAGAAQWRLPAFSSDDGVHVLWERNTQLGLAM
ASLSSGSNTAGSPTAFIDVRKSSSSDASDAENNRQTSCVHPFVCGTGFTPSEELVVQVSQ
NSNSSGARWLGKERYVIAADEQGQFRIQMTALVLTAGQTVLDGLVVIQTSTSAELHVQSA
AVTA
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaccaaggagctggtgcagtcgctgtttgcaccaaatgtccttgtgctctgg
acaaaagaagcagaggcaacatgcatgcaacgtgggctctcgtgcaagcatcttttggct
ccctttggtcgatcacgcagccaggctcctgatgttcaatttcgcaccctggatgacctt
cgccccctagttgtggaggacggcatcgcccagacgaaagcagcggttactcaacatgaa
ggcctgtgtgaagactggaacattggatcaggcgttgcgccgtggttcaacgactactgc
caccacttcttctccctcatgcgcccgtgtgaccacgagttctttggccatccgctcctc
cgcatcgtcctctgcactgccaagggcgacgaccccatcacatccatcgcctcctccctc
tcctcccagaagcaacgggatgccttttctgcgtttccgtatgtttcccaggacattccc
acgtgttatctcctcctctctgaccatcatgacgacgatgcaactgtgaccgccttcttg
cagaggctatccaatgatttcggctccaagaactgttttcatgtcccgctacagcaagca
gcagatggcgacgaggaacaggatgtgtcggacgtgtggacgactgcactgccggcgctc
gcctccgccgcccaatcccgcccacagagcacaacagaagagccgacagcgccgcccgtt
gatgccgaccccctctccgccatggcgtcaatggcaaacgcggatcctgagcgagtcggg
cttgcagccgggttttgcatcgcggatgtgcagaagctcaaggacacatgtgcagcaatt
gtcgacacggcgctcgtgccggccgttcgccaccatgcgcagctcctctccgccgaggtc
accgccacgcgcaagagtcgatcaacgtttctaaacgccactcggaagtggttttcgagc
ggaaaatcggcccagtctggcactggccaggatccctatgccccagattcgtttgagatg
cagacacgccgccttgctgacttgctctttatgatcaaggaatacgacgacgcgtaccag
cactaccgccacctacgcaaggacttcaacaacgaccgctcgtggaagcatctcgccggc
gccaacgaaatgcttgctgcgtgcatgctgcttgatccgcgtctggaccagggcagatac
gagagccggcagctgtttgagagcgcaatggccacgtataacaagtctggcatgcctttc
cacaccgcgcgcgttgccatcaccgctgctgcagatttcactgcccgcacccaacatgcg
gacgcggcggccacgtttgtgcgcgttgtctcggaggagtctgatctgcgcagtgccatt
ttcctcgaacaggctgcgacgtgctactttgcatcgccgtcatcgcgccgcaaggccgca
ttccacctcgtccttgccgcttttcgcttcatcaaggcgcaccagcgcatgcacgcccgc
agatgctacgtacaggctgaaaagttgttttcgggtcttgggtggcagcacattgaggat
cacatccaccagtcgctggccagacaatgcgaacaactgggcctcctccataaaagcatt
gacgcatatgcgcatgtgcttcgcgaatgtcccggcagtgctcgctcccacagcgatgtg
ctcggcactttcatgcacctctaccggcacctgcaggagagtgaggacgccgcgtccgcg
ccccctccacttcctgttccaatcgtcaacaagaacattcgtgtccgccttcagctgcag
gctaatacacaagcagcacacatctcccaacaggaggaaaaggttgcggcgtttatgaac
aagcctcaggttcatcaggccgcggtgctgagcgacaagacgaccaacacctcgccggcg
acagtcgttgttgaagagcccgttggtgttgaattccagctcacgaatcctctggccact
tcgctccgcctcaccgccctcaagctcgtgtgcacgctggtcgatgctgatggcaacgag
tgcaaaccggaccagcttgagctcacggagatggttgagattgaaatgggcgctggcgag
gatgttgatgttgtcctcaccgccatgccactcacacagggcacacttcacgtcaagggc
atcaggtacaacatccatcttggccaatcggaaattgctggccagcagccgctgttggtc
cgcggcaaacgcttgaactcaacacacgccgagcgaacagcgtgcgtgtatgcaccagac
aagcggttggacttgcgagttgtctctgcaagccccctcttcacttaccagagcactcct
cttcctgcggaggtgttgcgtgggcaggttgtgaccgtggaggtggatgtcaagaatcag
ggaacagcaccaaccgccaacgtcgtctgcgtctttccagaacatgcgtggaaaccgcac
attgagcttgaggatggcacgcaactgccagcggagggccaatgcgtagacctctcctcg
gtggtgcaactttcccctggcgatgccacgcgtttccgcgcgcgcttccaagtggccccg
cacgcgccagatgcgtttgcgctgtgcattggctaccgtggacagaacccaccgcagcag
cttccctatcgtatggtcacgctctcctgccgcatgcgcgcagcagagggtcccgccgtc
accgccaccatcattccaacatcggcaacgcgcgccctgcttcgcctcgtcttctccccg
gtgcctaaggatgtgcagctgtgcgagtgcttattgcgcaactcgcactggatgctggac
acgagcaccatcattgcagaccacgccctcccaccaacgcctggtgccacccgtgttgcc
cttttgccgtgcgtgcccgctaccagcgcgccgtctgcacttccgccagccgtttcacta
caggtccccaccaacagcactggtgctgctggtgctgcacagtggcgactgcctgcgttt
tcttcggatgacggtgttcatgtgctgtgggagcgcaatacgcagcttggccttgccatg
gcatccttgtccagcggcagcaacacggcgggctcgcccacagccttcattgacgtgcgc
aaatcatcaagctccgacgctagtgatgcagaaaacaacaggcaaaccagctgtgttcac
cccttcgtgtgtggcactgggttcacgcccagtgaggaacttgtggtgcaagtgtcacag
aacagcaattcatcgggggcaagatggcttggcaaggagcggtacgtgatcgccgcggac
gagcaagggcagtttagaatacagatgactgcgcttgtgctcaccgcgggccagacggtg
ctcgacggccttgtcgtcatccaaacatccacttccgccgaattgcacgtgcagtctgca
gctgtcactgcatga
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