Salpingoeca rosetta: PTSG_11540
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Entry
PTSG_11540 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
sre
Salpingoeca rosetta
Pathway
sre04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
PTSG_11540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sre04131
]
PTSG_11540
Membrane trafficking [BR:
sre04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
PTSG_11540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
WD40
zf-RING_5
ANAPC4_WD40
NBCH_WD40
DUF2972
zf-C3HC4
zf-C3HC4_2
DNA_pol_phi
zf-RING_UBOX
IBR
Motif
Other DBs
NCBI-GeneID:
16067614
NCBI-ProteinID:
XP_004998644
UniProt:
F2TVH6
LinkDB
All DBs
Position
Unknown
AA seq
966 aa
AA seq
DB search
MLLEVEAGEVVTMTERREMMVDEEDGADATPLRALDSGDGDSDEDSGEGSSGDSDDSDDG
EEEETEEDDEGEEDDSDDDEDDDDEDDDDDDDDDDDDEEEEEEEEELPRLTFYKLGADVP
TILNDRVATCFAVSSKFAILGTDLGSIHILDAMNGTEVQRYTQHSERVTDISIDRYGDFV
ATGADDGKVIIRNLYDAKAVLSFSFDRPIRSVAIDPEYPKKKKNMFITGGKAGQLLLHVD
KSFAFFSRTNATVLHSGEGCVSIVRWRGPYVAWANDIGVKLYDTTLNQRIASVDRPQNSP
SAEEYQCRLSWKDDKTLLMGWADHIAVGEIRQRAEPAGPGEPNVFMQLLVRIETSFWISG
IAPFSAEEMALLAYLDSEVELESGQKALCGDVPELKILTMAALEVSSSDLAVEDYDKFRA
NDYFFESIPDENVYFIVSPRNIIVGKPLSMDERIEWLIKHDRHEDAVNVADENHALLTAY
TPTKVREAWLQSLLEKGMFDHAAALTQPTFNTDVLLWEKWIAIFRKFGALNNLAKYIPRD
EPRLKESTYTGVLLTYLDTDLTLFNAILTKWVAVIKIDEIVQAVENKNLKNPSNQLRNIL
AFLYARTNQKDKSLNIYLDLGRTEAFDLLNQKPLLFQHVKDRVVDMIRLDQERAIALLTE
NVDQMPVSSVLPQLEHEPVLQLQYLEAMAMKDEAVARKFGHRLVLLTADHARHKLLRLLQ
TNHAIPYREALKICQEKKLWREYAYCLQRGGKVKEAMVLMITQLGLVEEAIELVAQENDE
TLWDDLIDQCFASENPEHIRLLLANSGSYINPLKIIQRPDLRGRVIDGLRDSLVKILSDF
NLQIDLLKGSTAIMMNDCVDLTMKLHRLRKRAIVTEPAKAHCHNCSRALASFSGTRDEAL
LFRCKHMFCRTCLQEFVAGRQRSRSMHSNAPQQPIELNFCPICTRSARRPRGGGRGAVGA
TRPIRR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgttgttggaggtggaagcaggagaagttgtgacgatgacagagcgacgtgagatgatg
gttgacgaggaagatggcgcggatgcaacccctcttcgagctctggatagcggtgatggg
gacagcgacgaagactccggcgaaggcagctctggagactctgacgactcagatgacggc
gaagaagaagagacagaggaagacgacgaaggcgaagaggatgacagcgatgacgacgaa
gacgacgacgacgaagatgatgatgatgatgatgacgatgatgacgatgatgaggaagag
gaagaggaggaagaggagcttcccaggctcactttctacaagcttggtgctgatgtgcca
accatcctcaatgatcgcgtggcgacatgctttgccgtgtcctcaaagtttgctattctg
gggacagacctcggctctattcacatcctggacgcaatgaacgggacagaagtgcaacgg
tacactcagcactcggaacgcgtgaccgacatctccatcgaccgatacggcgactttgtt
gcaaccggtgctgacgacggcaaggtcatcatccgcaacttgtacgacgccaaagccgtt
ctctccttttccttcgaccgccccattcgctctgtggcaattgatccagagtacccaaag
aagaagaaaaacatgttcatcactggtggcaaggccggacagctgctgttgcatgtcgac
aagtcatttgcattcttttctcgcacaaacgccactgtgctgcacagcggagaagggtgc
gtgtcgattgttcgctggcgcgggccttatgtcgcctgggcaaacgacattggcgtgaag
ctctatgacaccacgctgaatcagcgcattgcgtccgttgaccgcccacagaacagccca
tctgctgaagagtatcagtgccggctgtcgtggaaggatgacaagacgcttctcatgggc
tgggcggaccacattgccgttggagaaattcgccagcgggccgagccagccgggcctggc
gaaccaaatgtgttcatgcagctgctggtgcggattgagacgtcgttttggatcagcgga
attgcgcccttcagtgctgaggaaatggcgctactggcgtatcttgactctgaggttgag
cttgagtctggacagaaggcgctgtgtggagatgtgcccgagctgaagatcctcacgatg
gccgcgcttgaagtgagcagcagcgatcttgctgtcgaggattacgacaagttcagggcg
aacgactacttcttcgagagcatcccggacgagaatgtgtactttattgtgtcgccgcgc
aacattatcgtcggcaagccgctgtcgatggacgagcgcattgagtggttgatcaaacac
gatcgacacgaagatgccgtcaacgtcgccgacgagaaccacgcgctcctcaccgcatac
acgcccacgaaagtgcgggaggcgtggctgcagtcgctgctggagaagggcatgttcgac
cacgccgcagcgttgacacagccgacattcaacacggatgtgctgctgtgggagaagtgg
attgcgatattccgcaagtttggggccctcaacaaccttgccaagtacattccacgcgac
gagccacgattgaaggaatcaacatacacgggtgtattgctgacatacctcgacacagat
ctcacgctgttcaacgccatcctgacgaaatgggtggccgtcatcaaaattgacgagatt
gtgcaggctgtcgagaacaagaacttgaagaacccatccaatcagctccgaaacatcctc
gcattcctgtatgcgcgcacgaaccagaaggacaagagcttgaacatttatctcgacctc
ggccgcacggaggcatttgatctcctcaaccagaagcccctcctcttccagcacgtcaag
gaccgtgtggttgacatgatccgccttgaccaagagcgcgccatcgcgctcctcacagag
aatgtcgaccagatgcccgtctccagcgtgctgccccagctcgaacatgagcccgtgctg
cagctgcagtacttggaggcaatggcgatgaaagacgaggcggttgcgcgcaagtttggg
caccgccttgtcctcctcactgcggatcacgcacggcacaagctgctgcggctgctgcag
accaaccacgccatcccctaccgcgaggcgctcaaaatctgccaggagaagaagctgtgg
cgtgaatacgcgtactgcctccagcgcggcgggaaagtcaaggaggcaatggtgctgatg
atcacacagcttggcctcgtggaagaggcgattgagttggtggcgcaggaaaacgacgag
acgctgtgggatgatttgattgaccagtgctttgccagcgaaaacccggagcacatccgc
cttctcctcgccaactcgggctcctacatcaacccgctcaagatcatccagcgcccggat
cttcgtggccgcgtcatcgacgggctcagggattcgctcgtcaagatcctctcagacttt
aacctccagattgatctgctcaagggctcgacagccatcatgatgaacgactgtgtggac
ctcaccatgaaactccacaggctgcgcaaacgcgccattgttacagagccagcaaaggcg
cactgccacaactgtagcagagccctcgcctcattcagcgggaccagagacgaagccctg
ctattccgatgcaaacacatgttctgccgcacatgtttgcaagagtttgttgccggtcgc
cagcggtctcgctccatgcattccaacgctccgcagcagccgattgagctgaatttctgc
ccaatttgtactcggagcgcacggcgtccacgcggcggcggtcgcggtgctgttggcgca
acccggcccatcaggcgatag
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integrated database retrieval system
