Sediminicoccus rosea: LHU95_06190
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Entry
LHU95_06190 CDS
T08103
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
srf
Sediminicoccus rosea
Pathway
srf00521
Streptomycin biosynthesis
srf00523
Polyketide sugar unit biosynthesis
srf00541
O-Antigen nucleotide sugar biosynthesis
srf01100
Metabolic pathways
srf01110
Biosynthesis of secondary metabolites
srf01250
Biosynthesis of nucleotide sugars
Module
srf_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LHU95_06190 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LHU95_06190 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LHU95_06190 (rfbC)
Enzymes [BR:
srf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LHU95_06190 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UPY38285
UniProt:
A0A9E7A917
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Position
complement(1388063..1388629)
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AA seq
188 aa
AA seq
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MKITPQSIPDVLLIEPNRFGDPRGFFSEVWKRSALAALGFTADFVQDNHSLSREVGVLRG
LHFQRPPTAQGKLVRVVRGRILDVAVDIRQGSPSYGQHVACELSAENWRQLWVPRGFAHG
FLTLEPETEVLYKVDAEYDRATDAGIAWDDPVLAINWPIPPHGVILSDKDRTAPRLADIA
PPFPAGSL
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcacgccgcaatccatccccgacgtcctgctgatcgagcccaatcgcttcggc
gatccgcgcgggttcttcagcgaggtctggaagcgcagcgccctggcagccctcggcttc
acggcggatttcgtccaggacaaccactccctctcgcgggaggtgggcgtgctgcgcggc
ctgcatttccagcgcccacccacggcgcaaggcaagctcgtacgcgtcgtgcggggacgg
atcctggatgtggcggtggatattcgccagggcagcccaagctatggccagcatgtggcg
tgcgaactctccgccgagaactggcgccagctctgggtgccgcgcggctttgcccatggt
ttcctgacgctcgagcccgagaccgaagtgctctacaaggtggatgccgagtatgaccgc
gcgaccgatgcgggcattgcctgggatgatccggtgctggcgatcaactggcccatcccg
ccgcatggcgtgatcctctcggacaaggaccgcacggcgccgcgcctcgccgatatcgcc
ccgccctttccggcaggctcgctctga
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