Sediminicoccus rosea: LHU95_14250
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Entry
LHU95_14250 CDS
T08103
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K02438
glycogen debranching enzyme [EC:
3.2.1.196
]
Organism
srf
Sediminicoccus rosea
Pathway
srf00500
Starch and sucrose metabolism
srf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
LHU95_14250 (glgX)
Enzymes [BR:
srf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.196 limit dextrin alpha-1,6-maltotetraose-hydrolase
LHU95_14250 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_77
CBM_48
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
UPY39361
UniProt:
A0A9E7DAU8
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All DBs
Position
3028817..3032749
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AA seq
1310 aa
AA seq
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MTAPSELGVTLRGDGVEVAIPAPGAARLFFCTFDGATETARIALPHRQGDVFHGVIPGIA
PGMAYGLRAEGAGFDPDKLLLDPWARALEAPLRLHPTAFGAHAGDSGPHVTRAVVAPPLP
ATPWTALPPRPDVIYELHVKGFTALHPDIPEAIRGTFAGLAHPAAIAHLTRLGVTLVELL
PVAAWVDERHLPPLGLTNYWGYNPIAFLAPDPRLAPGVGNGGGMAEVRAAVTALRAAGIG
VILDVVFNHTGEGDALGPTLSLRGLGEPHWYRLGHNESGCGNVLALDRPWPLRLVMDALR
HWAEQAGVDGFRLDLATTLGRADAGFDPHAPLLAAMRQDPVLRHRRIIAEPWDIGPDGYQ
LGRFPPGWGEWNDRFRDDIRRFWRGDGGMLGPLATRLAGSADAFPDRIADSVNFITAHDG
FTLADLVAYTQRHNLANGEQGRDGSGENHSWNHGTEGPDPALHARRQADIRALLTTLLTA
RGTPMLAMGDEGGRSQGGNNNAYAQDNATSWLDWRKLDQDLVDFTGRLIAARRAHPALHA
TTPLSGTAADDTSLPDVEWRHPEGHALAPEDWSASRALVAVLSEGTDRVLIGVNGGAEPR
RLHPPRPRWGFRWQVLADSAASLTAAEIAPRSVLVLTEAPALPPRAEAAEPALLGQLAAA
AGIAPHWHDLTGREHEVPEATLRCVLSALQLPAESASQARDSLARRRHRPALPPHVAARA
DTPTRLHVGEGLPLRLDLHLALEDGSARDFTATIEAEHILLPPLPEGRHVLRWRDALCRI
TAAPTACFLPVERRRFGITAQSYALRHAQDQGMGDFTAIADLARGAARHGALWLGISPPH
ALMPLDRERASPYQPSDRRFLEPLLIDVSRLPEAAPDAALFAALRQGDLVDYPSVWAAKR
RVLAAAWARFDRGDADFQAFRTRGGAALERFAAFNALSERHGHSDSRRWPAGLRHGRDAG
LAGFMAAEADAVGFHFWLQFLADRQMAEAAHAGAGLYRDLAVGMAGDGAEFWAGDTAFLA
GVSIGAPPDPLGPLGQIWGVPPPDPLAAEAEGHAGFAALIRANMRHAAALRIDHVLGLKR
LFLVPDGASAGEGCYLDQPFAAALGEITLESQRAHCAVVGEDLGTVPDGLREALGAARIL
SYRVLWFEREGQAFRPAAHYPRLAAACVATHDIPTLAGWWEGTDITEREKLGLLDAAAAA
DARAERTAERDILLATTGCARPSPEAAAQPGQPTALPAEVTAAIHAYVSATPSLMLLLQA
EDLGGERIGVNLPGTDRERPNWRQRMATEAATLCDSPLASAILAAVAERR
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
ctgaccgcgccctctgagcttggcgtcacgctgcggggggatggggtggaggtggccatc
ccggcacccggcgcggcccggctgttcttctgcacgtttgatggcgccacagagacggcg
cgtatcgccctgccccatcgccagggcgatgtgtttcacggcgtcatccccggcatcgcg
cccggcatggcctatgggctgcgcgcggaaggggcggggtttgatccggacaagcttctg
ctcgacccctgggcgcgcgcgctggaagcgccgctgcgcctgcatcccaccgccttcggc
gcccatgccggcgacagcggcccgcatgtgacccgcgcggtggtggcgccccccctgccc
gccaccccctggaccgccctgccgccaaggccagacgtcatttacgaactccatgtgaag
ggcttcacagcacttcatccggatattcccgaggccattcgcggcaccttcgccggcctg
gcccaccccgccgccatcgcgcatctgacgcgccttggtgtcacgctggtggagctgctg
cccgtggccgcctgggtggatgagcggcatctgccgccgctcggcctcaccaattactgg
ggctataatccgatcgctttcctcgcacccgacccgcgcctcgcacccggggtcgggaac
gggggcggcatggcagaggtgcgggccgccgttaccgcgctgcgggccgccggcatcggg
gtgatcctggatgtggtgttcaaccacacgggtgagggcgatgcgctgggccccaccctc
agcctgcgcggcctcggcgagccccactggtatcgcctggggcataatgaaagcggctgc
ggcaatgtgctggcgctggaccggccctggcccttgcgcctggtcatggatgcgctgcgc
cattgggcggagcaggccggggtggatggcttccggctggatcttgcgacgaccctgggc
cgggcggatgccggctttgacccccatgccccgctcctggcagccatgcgccaggacccg
gtgctgcgccatcgccgcatcatcgccgagccttgggatatcgggccggatggctatcag
ctgggccgcttcccccccggctggggcgagtggaatgaccgcttccgcgacgatatccgc
cgcttctggcggggcgatggcggcatgctggggccgctcgccacgcgcctggccggttcc
gccgatgccttcccggaccgcatcgccgacagcgtgaacttcatcaccgcgcatgacggc
ttcaccctggcggacctggtcgcctacacgcagcgccacaacctcgccaatggcgagcaa
gggcgggacggctcgggcgagaatcattcctggaaccatggaacggaagggccggacccc
gcgctgcatgcgcgccgccaggccgatatccgcgccttgctcacgacgttgctgaccgcg
cgcggcacgccgatgctggccatgggcgatgagggtgggcgcagccagggtggcaacaac
aacgcctatgcccaggacaacgcgacctcctggctggattggcgcaagctcgatcaggac
ctggtggatttcaccggccggctgatcgcggctcggcgcgcgcaccccgcactccacgcc
accacgccgctgagcgggacggccgctgacgacacaagcctgcccgatgtggaatggcgc
catccggagggccacgcgctggccccggaagattggagtgcctcccgcgccttggtcgct
gttctgagcgaaggcacggaccgcgtgctgatcggcgtgaatggcggcgccgaaccccgc
cggctgcacccgccccgcccgcgctggggctttcgctggcaggtgctggcggatagcgcc
gccagcttgaccgccgccgagatcgcgccgcgttccgtcctggtcctgaccgaggccccg
gccctgccgccccgcgcggaggccgcggagcctgccttgctcggccagctcgccgccgct
gcgggcatcgcgccccattggcatgacctgaccggccgcgaacatgaagtgccggaggcc
acgctgcgctgcgtcctgtcggcccttcagctcccggccgaatccgccagccaggcgcgc
gacagcctggcgcggcggcgccatcgccccgccttgccgccgcatgtcgcagcccgcgcc
gatacgcccacgcggctgcatgttggcgaagggctgcccctgcggctggatctgcatctg
gccctggaagatggcagcgcgcgggatttcaccgccaccatcgaggcggagcacatcctt
cttccgcccctgcccgagggccggcatgtgctgcgctggcgcgatgcgctctgccgcatc
acagcagcccctacagcctgcttcctgccggtggaacgccgccgcttcggcatcaccgcg
caaagctatgcgctgcgccatgcgcaggaccagggcatgggcgatttcaccgccatcgcc
gatctggcgcgcggcgcggcgcggcatggcgcgctctggctcggcatcagcccgccacat
gcgctgatgccgctggatcgcgagcgcgcgagcccctaccagccatccgaccgccgcttc
ctcgaacccctgctgattgacgtctcccgcctgccggaagccgccccggatgcggcgctt
tttgccgccttgcggcagggtgacctggtggattacccctcggtctgggccgccaagcgc
cgtgtgctcgccgccgcctgggcgcggtttgaccggggagacgccgatttccaggccttc
cgcacccggggcggtgcggcgctggagcgcttcgccgcgttcaacgccctctctgagcgc
cacggccacagcgattcgcgccgctggccggcaggattgcgccatggccgcgatgcgggc
ctcgctggctttatggccgccgaggccgatgcggtcggcttccacttctggctgcaattc
ctggccgaccggcagatggccgaagcggcacatgccggcgccggcctctaccgggatctg
gcggtgggcatggcgggggatggcgcggagttctgggcgggcgacacggcattcctggcc
ggagtttcgatcggcgccccgcccgatccattggggccgctgggccagatctggggtgtg
ccgccgcccgaccccctcgccgccgaggccgagggtcatgccggctttgccgccctgatc
cgggccaatatgcgccacgcggcagcgctgcggattgaccatgtgctggggctgaagcgg
ctgttcctggtcccggacggcgccagcgccggtgagggctgctatctggaccagcccttc
gcggccgcgctcggcgagatcaccctggaaagccagcgcgcccattgcgccgtggtgggc
gaggatctgggcaccgtgccggatggcctgcgcgaggccttgggcgcggcgcgcatcctc
tcctatcgcgtgctgtggtttgagcgcgagggccaggcattccgccccgccgcgcattac
ccccggctcgccgccgcctgcgtcgccacgcatgacatcccgaccctggccggctggtgg
gaggggacggatatcaccgaacgagagaagctgggcctgctggacgccgccgcggcagcc
gatgcgcgcgccgagaggacagcggaacgcgatatcctgctggcaacgaccgggtgtgcg
cggccgagccccgaggctgccgcccaacccggccagccgaccgccttgcccgccgaggtg
accgcggccatccatgcctatgtctccgccacgccctccctcatgctgctgctgcaggcc
gaggatctgggcggggagcggattggggtcaatctgccgggaaccgatcgggagcggccc
aattggcgccagcgcatggcgaccgaggcggcgacgctgtgcgacagccccctggcgagc
gccatccttgcggctgtcgcggaacggcgctga
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