Sphingomonas rhizophila: H9L12_11220
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Entry
H9L12_11220 CDS
T07014
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
srhi
Sphingomonas rhizophila
Pathway
srhi01501
beta-Lactam resistance
srhi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
srhi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H9L12_11220
01503 Cationic antimicrobial peptide (CAMP) resistance
H9L12_11220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srhi02000
]
H9L12_11220
01504 Antimicrobial resistance genes [BR:
srhi01504
]
H9L12_11220
Transporters [BR:
srhi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
H9L12_11220
Antimicrobial resistance genes [BR:
srhi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H9L12_11220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
QNN64802
UniProt:
A0A7G9SAC7
LinkDB
All DBs
Position
2200000..2203194
Genome browser
AA seq
1064 aa
AA seq
DB search
MSRLFIDRPILAWVIAIVVMLAGIGALRALPVEQYPDVAPPQVNIRASYPGASAETIENS
VTQILEQQLVGIDNLLYFSSTSSSRGSVSISAVFAKGTDPDTAQVQVQNQVQQAVSRLPT
QVQQQGIRVTKSNPDFLLIVAVYDETDRRTNMDVSDYLSSNLQDPLSRVEGVGDVNVFGA
PHAMRIWLNPQRLAAFSLMPSDVIAAVQAQNTEVAAGEVGGLPQPQGQMLNATVTAQSKL
QTADQFKAVVLKTDPSGAVVTIGDVARVELGADNYSSVVRVNRHPGAGMAISLAPGADAL
RTAELVKDKVEELSRSFPDGIKFAYANDTTNFIKLSVEEVQKTLIEAIILVIIVIFVFLQ
NWRALLVPAIAIPVVLLGTFAVFYLAGFTLNTMTLFGLTLAVGLLVDDAIVVVENVERLM
EENPGMSAREATIQSMQEIQVALVAIAMVLSAVFLPMAFFGGSTGVIYKQFSLTIIAAMV
LSVFVALIFSPALTATLLRPPPREGEVRESWIDRRFPAVGRALNRGQTWFNDGFERMTTR
YRASIVAVIERKWLALGIYAVMCVVLAALFLRLPTGFLPTEDQGAASIQIRLPAGATQAR
TLEVRDQVERYFAEHEAKNIATLFTVAGGGGGGASGQNTGQGFINLAPWDERTAKEDSAD
AIVERASGAFRGLRDAQVFALVPGAIRGLGQSSGFTMELQNSSGMTRDQFVAAREKLIEL
ASANPKLTGVRLSDLPDQPTLKIDVDQQKLTALGLSQSDVNNTLSTAWGGRYVNDFIDAG
RVKRVYVQGDTEYRANPESLGQWYVRNSSGEMAPFDSFSRQSWETTPSSLSRFMGLPAFE
IQGQPAPGVSSGEAMDEMERLAAQIPGTTTAWAGQSFQERLSSGQAPLLYGISLLVVFLC
LAALYESWSVPVAVLLIVPLGLVGAVFAVTLRGLENDVYLQIGLLTTMGLASKNAILMIE
FAEQAERKGARVIDAALEAARIRLRPILMTSVAFIFGVLPLAIASGAGANSRIAIGTAVI
GGMLTATVLAIFYIPLFFVLVRRGVRDGLKMVRERFRRPREAQA
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcgactgttcatcgaccggccgattctggcctgggtcatcgccatcgtcgtcatg
ctggcaggcatcggcgcgcttcgggcgctgccggtcgagcaatatcccgacgtcgccccg
ccacaggtcaacatccgcgccagctatcccggcgcgtcggcggaaacgatcgaaaacagc
gtcacccagatcctcgagcagcaactggtcggcatcgacaatctgctctacttctcctcg
accagcagctcccgcggatcggtgtcgatttccgccgtgttcgccaagggcaccgatccc
gacacggcccaggtgcaggtccagaaccaggtccagcaggccgtctcgcgcctgccgaca
caagtgcagcaacagggtatccgggtcaccaagtccaacccggatttcctgctgatcgtc
gccgtctatgacgagaccgaccggcgcaccaacatggacgtatcggactatctgtcgtcc
aacctgcaggatccgctgtcccgcgtcgaaggggtcggcgacgtcaacgttttcggcgcg
cctcacgcgatgcgcatctggctcaatccgcagcgccttgccgccttctcgctgatgccg
agcgacgtgatcgccgctgtccaggcccagaataccgaagtcgcggcgggggaggtcggc
ggcctgccccagccgcaggggcagatgctcaacgccaccgtcaccgcccagtcgaagctg
cagaccgccgaccagttcaaggcggtggtcctgaaaaccgatccgtcaggcgcggtcgtc
accatcggcgacgtcgcccgggtcgagcttggcgccgacaattacagttcggtcgtccgc
gtcaatcgccaccccggcgctggcatggccatctcgctcgctcccggcgccgacgcgctg
cgcaccgctgaactggtcaaggacaaggtcgaggaactgtcgcgctcgttccccgacggc
atcaagttcgcctacgccaacgacaccaccaacttcatcaagctgtcggtggaggaagtg
cagaagacgctgatcgaggcgatcatcctcgtcatcatcgtcatcttcgttttcctgcag
aactggcgggcgctgctggtcccggcgatcgcgattccggtcgtgctgctcggcaccttc
gccgtcttctatctcgccggcttcaccctcaacaccatgaccctgttcggactgacgctg
gcggtcggcctgctggtcgacgacgccatcgtcgtggtcgagaatgtcgagcgattgatg
gaagaaaatccggggatgagcgcgcgcgaggcgaccatccagtcgatgcaggaaatccag
gtcgcactggtcgccatcgccatggttctgtcggcggtgttcctgccgatggctttcttc
ggcgggtcgaccggcgtcatctacaagcagttttcgctgaccatcatcgccgcgatggtg
ctgtcggtgttcgtcgcgctgatcttctcccccgcgttgaccgccaccctgctcaggccc
ccgccccgcgagggcgaggtgcgcgaaagctggatcgatcgccgcttccccgctgtcggc
cgggcgctgaatcgcggccagacctggttcaacgacggcttcgagcggatgacgacccgg
tatcgcgcctcgatcgtcgcggtgatcgagcgcaagtggctggcgctgggcatctacgcg
gtgatgtgcgtcgtcctggccgccctgttcctgcgcctccccaccgggttcctgccgacc
gaggaccagggagcggccagcatccagatccgccttcccgccggcgcgactcaggcgcgc
acgctggaagtccgcgaccaggtcgagcgctatttcgcggagcatgaggccaagaacatc
gcgaccctattcaccgtcgccggcggcggtggcggcggtgcgtcgggccagaacaccggg
cagggcttcatcaacctcgccccttgggacgagcgcaccgccaaggaagacagcgccgac
gccatcgtcgagcgcgcgtcgggcgccttccgcggccttcgcgacgcgcaggtgtttgcc
ctcgtccccggtgccattcgcggcctcggccagtcgagcggcttcaccatggagctccag
aacagcagcggcatgacccgcgaccagttcgtcgccgcgcgcgagaagctgatcgagctt
gcctcggccaaccccaagctcaccggcgtccgcttgagcgacctgcccgaccagccgacc
ctgaagatcgacgtcgaccagcagaagctgaccgcgctcggcctcagccagtccgacgtc
aacaacacgctgtcgacggcatggggcggccgctacgtcaacgacttcatcgacgccggc
cgggtcaagcgggtctatgtccagggcgacaccgaatatcgcgcgaaccccgaaagcctc
ggtcagtggtatgtgcgcaattccagcggtgagatggcgccgttcgacagcttctcccgc
cagagctgggaaaccacgccgagcagcctgtcgcgattcatgggcctgcccgcgttcgag
atccagggtcagcccgcgcccggcgtcagttccggcgaagcaatggacgagatggagcgg
ctcgcggcgcagataccgggcaccaccaccgcctgggccggccagtcgttccaggagcgg
ctgtcgtcggggcaggcaccccttctgtacgggatttcgctgctcgtcgtgttcctctgc
ctcgctgccctgtacgaaagctggtcggtgccggtggcggtgctgctgatcgtcccgctc
ggccttgtcggggcagtgtttgccgtaacgcttcgcgggctggagaatgacgtctacctg
cagatcggattgctgacgacgatgggccttgcgtccaagaacgcgattttgatgatcgag
ttcgcggaacaggccgagcggaagggcgcgcgggtcatcgacgccgcgctggaagcggcc
cgcatccggctccgcccgatcctgatgaccagcgtcgccttcatctttggcgtcctgccg
ctggccatcgccagcggcgccggcgccaacagccgcatcgccatcggcactgccgtcatc
ggcgggatgctgaccgcgaccgtcctcgccatcttctacatcccgctgttctttgtcctc
gtccggcgcggggtgcgcgatgggctgaagatggtccgcgaacgcttccgccgcccgcgg
gaggcgcaggcatga
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