Spirosoma rhododendri: HH216_04225
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Entry
HH216_04225 CDS
T08048
Name
(GenBank) transpeptidase family protein
KO
K03587
cell division protein FtsI (penicillin-binding protein 3) [EC:
3.4.16.4
]
Organism
srho
Spirosoma rhododendri
Pathway
srho00550
Peptidoglycan biosynthesis
srho01100
Metabolic pathways
srho01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HH216_04225
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HH216_04225
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srho01011
]
HH216_04225
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
srho03036
]
HH216_04225
Enzymes [BR:
srho01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HH216_04225
Peptidoglycan biosynthesis and degradation proteins [BR:
srho01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HH216_04225
Chromosome and associated proteins [BR:
srho03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HH216_04225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QJD77714
UniProt:
A0A7L5DHB3
LinkDB
All DBs
Position
complement(1075481..1077652)
Genome browser
AA seq
723 aa
AA seq
DB search
MANHKEQIIERAKHVSYLVFALALCVIGRLIYVQYFDSYQGRSWSDWKQKDFPVDTIRAM
RGNIYAVDGSLMATSLPSYEVGIDPTVAKEDYFRSKVDSLGLLLSRIYGDRTPRDYTQLV
RDARRKKRQYVLLSNRYVTFEERQEMLKWPFFRSSGRVSARGGVLRAHYERYHPFGTMAE
RTIGNLDPKTHRGQRGLEASFQTALAGHDAVGEVELLSGGVRKPVSDGPEMKPEPGMDLY
TTIDVNYQDMAESALRTTLEKYNAAKGCVVVMEVATGEIRAMANLSRVETRNGARYIETF
NHALAGGSDPGSTFKLATMMALLERKAISLNQPVATGDGIARWNGRTIRDAHRVGFGTLT
ARQVFEKSSNVGVHLLMRSYFYSRPADYCRLLRQFHLDKKTGIHMVGEAQPFLPNPDMKG
WSGQSATSMSMGYEMRQTPLQMLTLYNAVANDGFWVRPMLVRQVKLADEVKIENKPFVSS
ERICSLSTIRQVQSLLRGVVENGTAKKIASPYYTIAGKTGTAQKIENGLYKVGKYNTSFI
GYFPATKPKYSMIAMVDSPQGDNVDLLYAGAVSAPVFKEVADRIMAYDVQMQKPIRERSA
GKTPELLAGYADDMHTIDSVLGVKQRVNVEGWVEAGEKGRWAERATRAGHVPDVRGLTLR
DALFLLENRGLRVVVQGRGKVTDQSINPGTLVKQTPARQISLTLKEPDLPSKADSLTTKR
RSS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaccataaagaacagatcatcgagcgggccaaacacgtgtcttacctggtgttt
gccctggccctctgcgttatcggccggctgatctacgtacagtatttcgacagctatcag
ggccgaagctggagcgactggaagcagaaagactttccggtcgataccatccgtgccatg
cgggggaatatctatgccgtcgacggaagcctgatggccacatcgctaccgtcctacgaa
gttggtatcgaccccaccgttgccaaggaagactatttccggtctaaagtcgattcgctg
ggtttgttgctgtcgcgcatttacggcgaccgtaccccccgcgactacacgcaactggtg
cgcgatgcccggcgcaaaaagcggcagtacgttttgctgagcaaccggtacgttacgttt
gaagagcggcaggaaatgctcaaatggccgtttttccggtccagcgggcgggtatcggcg
cggggtggtgtgctgcgcgcgcattacgaacgctatcatccgtttggtacaatggccgaa
cggacgatcggtaatctagacccgaaaacgcaccgtgggcaacgggggctggaagccagt
tttcagacggccctggctggtcacgatgccgtcggcgaagtcgaattgctgtcgggtggc
gtgcgtaaacccgtttccgatggaccagagatgaagcccgaacccggcatggacctgtat
acaaccatcgacgtcaactaccaggacatggccgaatcggcgctgcggacgacgctggaa
aagtacaatgccgccaaagggtgcgtggtggtgatggaagtggctacgggcgaaattcgg
gcaatggcaaacctgagtcgagtcgaaacccgaaacggagccagatacatcgaaaccttc
aatcacgcgctggcgggtggctcggaccccggttcaacgtttaagctggcaacgatgatg
gccttgctggagcgtaaagccatttcgctcaatcagcccgtagccaccggcgacggcatt
gcccgctggaacggccgcaccatccgcgatgcacaccgggttggcttcggcacgctcacg
gcccggcaggtgttcgaaaaatcgtcgaacgtgggggttcacctgcttatgcgcagttac
ttctactcccgcccggccgattactgccggttgctgcggcagtttcacctcgacaagaaa
acgggtattcacatggtgggcgaagcgcagccgtttctgcctaaccctgatatgaaaggc
tggagcggacagtcggccacgtcgatgtcgatggggtacgaaatgcggcagacacccctg
caaatgctgacgctgtacaatgccgtagcgaatgacggtttctgggtacggcccatgcta
gtgcggcaggtaaaactggccgatgaggtcaagatcgaaaacaagccgtttgtgtcatcg
gagcggatttgttcactgtcgaccatccgacaggtgcagagtctgctgcggggggtggta
gaaaacggaacggctaaaaagattgccagtccgtactacaccattgccggaaaaaccggt
acggcccagaaaattgagaatggcctgtataaagtcggtaagtacaacacctcgtttatc
ggctacttcccggctaccaaaccgaaatacagcatgatcgcgatggtcgacagtccgcag
ggcgataacgtcgatctgttgtatgccggagccgtgtcagcacctgtattcaaggaagtc
gctgatcggatcatggcctacgacgtgcaaatgcagaagcccatccgcgaacggtcggcg
ggcaagacaccggagttgctggcgggttacgccgacgatatgcacaccatcgattcggtg
ctgggcgtgaaacagcgggtaaacgtggaaggctgggtcgaagcgggcgagaaaggccgc
tgggccgagcgggctacccgggccggtcatgtgcccgacgtgcgcggcctgaccctgcgc
gatgcgctgttcctgctggaaaaccgggggctgcgggtcgttgtgcagggtaggggcaaa
gtcaccgatcaatcgatcaatcccggaacattagtaaagcaaaccccggcccggcaaatt
agtttgacgttgaaggagcccgatctgccgtcgaaagccgatagtctgactactaaacgc
cgttcctcctga
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