Spirosoma rhododendri: HH216_10615
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Entry
HH216_10615 CDS
T08048
Name
(GenBank) TonB-dependent receptor
Organism
srho
Spirosoma rhododendri
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarboxypepD_reg
CarbopepD_reg_2
SdrD_B
fn3_3
Motif
Other DBs
NCBI-ProteinID:
QJD78829
UniProt:
A0A7L5DK51
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Position
2533903..2537163
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AA seq
1086 aa
AA seq
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MRYCMIRHSFTLIFILLSTLTWAQVTTSGLTGRITDAKKESLIGATVQALYTPTGARYAT
VTDAEGRYRINNMTAGGPYEITYSYVSFKTTTRSGVTLQLGETTDLNVVMEDASATLSEV
VVKGSRGGEREGAGINVGSETIRRLPTISRSLTDMTRLSPQVNNQNSFAGTNFRYNNVTI
DGAINNDAIGFSPSLGGSTGSSGQPGSSTRTNPVSLDAIQDIQVAVAPFDVRLGNFLGGS
VNAVTRSGTNKVSGSVYGFGRNAALTGSWNGASDAKEKLPSTFHEYQTGFRVGLPLIKDK
LFFFTNEEITNRQDPVQFQAGSPSSLIKDVAVAQQISDFVKTNYGLDAGSYGDYAIYSKS
TKFFNRLDWNINAKNQLSIRNNTVFSEATNLERDAANFRFGSIDFRQNNNQSSTVAELKT
QLGQASNSLIVGYSTVHDYRTTLSNVRTFPQVEIAYNGGTIFLGNDREASVFNLRQKTFE
ITDNFTFYKGINTFTVGTHNELYTIDYGFVNAPNGRISYAGTAANATTGTPARDGVQNFL
INLPNRVRGSYPFGDASNNLDNQFNNPYAHFNVNLFSLYAQDDIRVSDRVKLSPGIRLDY
TGLPNKPTLSPQVAASTGDPNYGTTYTYTPLNQITNSYLNNVQISPRLGLYIDAKGDKSL
IFRGGAGLFTGRIPFAWLGYAFYNNGVGYGAYDFNNNATATTKLVGDPLTPGGALGINNN
SANGGVRRTQVDLIDNNFKMPQMFRGNLAVDYTIAGYKITLEGLYTKVIQDLKFQQVNTK
DVVRYYSYDTQKQQPIYVGTTGTAGAQRIDNNFANAYLLSNTNQGYRYNLTAQIQKNYSA
GFGFSAAYTYGKAFDLTNGIRNSMESNWQLNQSLSPNNPSLAYSNFDIRHRIVGTVNYRQ
TWSPSNATTVTLFYSFQSGSPYSWGYVNSTINGSGQANSLAYIPKDLSEAQRLIPTGTQA
QDFLNFVQSDSYLSSRMGQFTERNGGRTPWNNTMDLRFLHEIKIANGHTLQLSYDILNFL
NLVDKKLGYYYFSPNTFNSTASIGLARATNPTTGDPTFTWSRPTTPYSIDPLGSRWQMQL
GARYSF
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgcggtactgcatgatacgccacagttttacgctgattttcattttactaagtacgcta
acctgggcgcaggttacgacaagcggcctgaccggtcgtattaccgacgccaaaaaagaa
agcctgattggtgcaaccgttcaggcgttgtacacccccaccggcgcacgctacgccacc
gtgactgacgcagaaggtcgctaccggatcaataacatgacggcaggcggtccttacgaa
attacctactcgtacgtaagctttaaaacgaccacacggtcgggcgtaaccctgcaactg
ggcgaaacgaccgatctgaacgtggtgatggaagatgccagcgcaacgctgagcgaagtt
gtcgtgaaaggcagccggggcggtgagcgcgaaggtgccggaatcaacgtcggtagcgaa
accatccgccgactgccaacgatctcgcgcagcctgacggacatgacccgtctgtcgcca
caggttaacaaccagaactcgtttgccggtactaacttccggtataacaacgtcacgatc
gacggtgctatcaacaacgacgctatcggcttcagcccatcgctgggtggttcgacgggt
tcgtcggggcaacctggttcgagcacgcgcactaacccggttagccttgatgctattcag
gatattcaggttgccgtggctccgttcgacgtgcggctgggtaacttcctcggtggttcg
gtgaacgccgtaacgcgcagcggtaccaacaaagtatcgggttcggtctacggatttggc
cgcaacgctgcgctgacgggttcctggaatggtgcgtcggacgcgaaagaaaagctgccc
agcacgttccatgaataccaaactggttttcgggttggtctgccactgattaaagataaa
ctgttcttcttcaccaacgaagaaatcaccaatcgccaggatcccgtacagttccaggct
ggttcgccttcgtcgctgattaaagatgtagctgtggctcagcagatttcggatttcgtc
aaaaccaattatggtcttgacgctggttcatacggtgactatgcgatttactcgaagagc
accaagttcttcaaccgacttgactggaatatcaacgcgaaaaaccagttgagcatccgt
aacaacacggtgttttcggaagcgaccaacctggagcgcgacgcggctaacttccgcttc
ggcagcatcgacttccgccagaacaacaatcagtcgagcacggttgccgaactgaaaacg
caactgggtcaggcgtcgaacagcctgatcgtggggtactctacagtacatgactaccgc
acgacattgtcgaacgttcgtacgtttccgcaagtagaaattgcctacaacggtggtacg
atcttcctgggtaacgaccgcgaagcatcagtattcaacctgcgccagaagacattcgag
attaccgacaactttaccttctacaaaggcatcaataccttcacggttggtacacacaac
gaattgtacacgattgactacggctttgtgaacgcacctaatggtcgtatttcgtacgca
ggaacagcggcaaacgctactactggcacacctgcccgtgatggtgttcagaacttcctg
atcaacctacccaaccgggttcggggttcgtatccgttcggtgatgccagcaacaacctc
gacaatcagttcaacaatccgtacgcacacttcaatgtcaacctgtttagcctctacgcg
caggacgacattcgggtaagcgaccgcgttaaactgtcgccgggtattcgtctggattac
acgggtctgccaaacaagccaacgctgagcccacaggtagctgcgtcgaccggtgatccg
aactacggaacgacctacacgtacaccccgctgaaccagattacgaattcgtacctgaac
aacgtacagatatcaccccgcctgggtctgtacatcgacgctaaaggcgacaagagcctg
atcttccggggtggcgccggtctgttcacgggtcgtattccgtttgcctggctgggatat
gccttctacaacaacggcgtcggctacggtgcgtacgacttcaacaacaacgcaacggca
acgaccaaactggttggcgatccgctgacaccgggtggtgctctgggcatcaacaacaac
tcggccaacggtggtgttcgccgaacgcaggttgacctgatcgacaacaatttcaagatg
ccgcagatgttccggggtaacctggccgtcgactacacgattgctggttacaagatcacg
ctggaaggtttgtacaccaaagtgattcaggatctgaaattccagcaggtaaatacgaaa
gacgtagtacgttattatagctacgatacgcagaaacaacagccgatctacgttggcacg
accggtacggccggtgcgcagcggatcgacaacaacttcgctaacgcctacctgctgtcg
aacacaaaccaaggctaccgctacaacctgacggcccagattcagaagaactactcggct
ggttttggcttctcggcggcctatacctacggcaaagcgtttgacctgaccaacggtatc
cggaactcgatggaatcgaactggcagctgaaccagtcgttgtcgccgaacaatccatcg
ctggcttactcgaacttcgatatccgtcaccgcatcgtgggtacggtcaactaccggcag
acctggagccccagcaatgctacgaccgttacgctgttctactcgttccagtcgggttcg
ccttactcatggggttacgtaaacagcacgatcaacggatcgggacaagcgaacagcctg
gcctacatcccgaaagatctgagcgaagcacagcggttgattccgacaggcacacaggcg
caggatttcctgaactttgttcagagcgacagctacctgagcagccggatgggtcagttc
accgagcgtaacggtggccgcacgccctggaacaacacgatggacctgcgtttcctgcac
gagattaagattgccaatgggcacacgctccagctctcatacgacattcttaacttcctg
aatctggttgataagaagctgggctactactacttctcgcccaacacgttcaactcgacc
gcgtcgattggtctggctcgtgcgacgaacccaactaccggcgacccgacgtttacctgg
agccgccctaccacgccgtactcgatcgatccgctcggttcgcgctggcagatgcaactg
ggtgctcgctatagcttctaa
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