Spirosoma rhododendri: HH216_18890
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Entry
HH216_18890 CDS
T08048
Name
(GenBank) SDR family oxidoreductase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
srho
Spirosoma rhododendri
Pathway
srho00521
Streptomycin biosynthesis
srho00523
Polyketide sugar unit biosynthesis
srho00525
Acarbose and validamycin biosynthesis
srho00541
O-Antigen nucleotide sugar biosynthesis
srho01100
Metabolic pathways
srho01110
Biosynthesis of secondary metabolites
srho01250
Biosynthesis of nucleotide sugars
Module
srho_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HH216_18890
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HH216_18890
01055 Biosynthesis of vancomycin group antibiotics
HH216_18890
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HH216_18890
00525 Acarbose and validamycin biosynthesis
HH216_18890
Enzymes [BR:
srho01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HH216_18890
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
adh_short
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
QJD80254
UniProt:
A0A7L5DP37
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Position
complement(4546568..4547548)
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AA seq
326 aa
AA seq
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MKRVLITGGAGFLGSHLCDRFIKEGYHVIAMDNLITGDIRNLEHLFKLPNFEFYHHDVSK
FIHVPGELDYILHFASPASPIDYLKIPIQTLKVGSLGIHNCLGLARVKKARVLIASTSEI
YGDPTIHPQPEEYWGNVNPVGPRGVYDEAKRFQEAMTMAYHTYHGLETRIVRIFNTYGPR
MRLNDGRVLPAFIGQALRGEDLTVFGDGSQTRSFCYVDDLVEGIYRLLLSDYAYPVNVGN
PSEITIKEFGEEIIKLTGTTQKLVFKELPKDDPKQRQPDITKAKAILGWEPKVSRSEGLR
ITYEYFKNLPEEELYHAAYHREFAKK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagtacttattaccggcggggccggctttttgggctcgcacctgtgcgaccgg
tttatcaaggaagggtatcacgtaattgcgatggacaacctgatcacaggcgacatccgc
aaccttgagcacctgttcaaactgccgaatttcgagttctatcaccacgacgtatcgaag
ttcatccacgtgccgggtgagctggactacattctgcacttcgcgtcgccggccagcccg
atcgattacctgaaaatcccgattcagacgctgaaagtgggatcgctgggtattcacaat
tgcctgggtctggcgcgggtgaagaaagcccgcgtgctgatcgcatcgacgtcggaaatc
tacggtgacccgacaatccacccacagcccgaagagtactggggtaacgtaaacccggtt
ggcccgcgcggtgtgtacgacgaagccaagcgttttcaggaagcgatgacgatggcctac
catacctaccacgggctggaaacgcgcattgtccggatttttaacacctacggcccccgc
atgcggctgaacgacggtcgggtattgcccgctttcatcggccaggccctgcgcggtgaa
gacctgacggtgtttggtgatggtagtcagacgcgttcgttctgctacgtcgacgatctg
gtagaaggcatctaccgcctgttgttgagcgactacgcttacccggtcaacgtcggtaat
ccgtcggagatcacgatcaaagagtttggcgaggagatcatcaagctgaccggcacaacg
cagaagctggttttcaaagagctgcccaaagacgatccgaagcagcggcaacctgatatt
accaaggcgaaagcgattctcggctgggaaccgaaagtttcccgttcggaaggattgcgc
atcacctatgaatacttcaagaacctacccgaagaagagctgtaccacgcggcttatcac
cgggagttcgctaaaaaatag
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