Serratia rhizosphaerae: FO014_18320
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Entry
FO014_18320 CDS
T07504
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
srhz
Serratia rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
srhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srhz03400
]
FO014_18320
DNA repair and recombination proteins [BR:
srhz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
FO014_18320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
zf-tcix
AAA_16
AAA_30
zf-ribbon_3
zinc_ribbon_2
SLFN-g3_helicase
AAA_22
AAA
DZR
Motif
Other DBs
NCBI-ProteinID:
QHA88771
UniProt:
A0A857EE38
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Position
complement(3932293..3934050)
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AA seq
585 aa
AA seq
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MAFTLRPYQLEAVDATISHFRQRPEPALIVLPTGAGKSLVIAELAKRARGRVLVLAHVKE
LVAQNHAKYCAYGLEADIFAAGLQQKQSGGKVVFGSVQSVARNLPLFDGAFSLLIIDECH
RISDNDDSQYQQIITHLQQRNPQLRLLGLTATPYRLGKGWIYQYHYHGFTRGDGSSLFRD
CIYELPLRYMIKNGYLVPPERLDMPIVQYDFSRLQANSNGLFSETDLNRELKRQDRITPH
IISQIVEYAETRKGVMIFASTVEHAREIHGLLPAGEAALVSAETPPAERDALIEAFKQQQ
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPDKEDCLILDYAGNP
HDLFTPEVGVRKPHGDSQPVQVFCPGCGFANLFWGKCTESGEIIEHYGRRCQGWLEDDDG
NREQCDYRFRFKSCPHCGAENDIAARRCHQCQEVLVDPDDMLKAALKLKDALVLRCGGME
LNSGRDDKGEWLKATYYDEDGASASERFRLQTPAQRKAFEMLFLRPHQRAPGVPFNWQQA
ADVLNQQALLRHPDFVVARKRGQFWQIREKVFDYQGRFRRADALY
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcatttaccctacgcccctatcagctggaagcggtcgacgccaccatcagccatttc
cgccaacgcccggaaccggcgctgattgtcttgccgaccggcgccggcaaaagcctggtg
atcgccgaactggcgaaacgggcgcgcggccgggtactggtgctggcgcacgtcaaagag
ctggtggcgcaaaaccacgccaaatactgcgcctacgggctggaggcggatattttcgcc
gccggactgcagcaaaagcagagcggcggcaaggtggtgttcggcagcgtacagtccgtc
gcgcgcaacctgccgctgtttgacggcgcgttttccctgctgattatcgacgaatgtcac
cgcatcagcgacaacgacgacagccagtatcaacagatcatcacgcatttgcagcagcgt
aatccgcagctgcgcctattggggctgaccgcaacaccctaccggctgggcaaaggctgg
atttatcaataccactaccacggctttacccgcggcgacggcagcagcctgttccgcgac
tgcatttacgagctgccgctgcgctatatgattaaaaacggctatctggtgccgccggag
cggctcgatatgccgattgtgcagtatgacttcagccgtctgcaggccaacagcaacggt
ttattcagcgagacggatctgaaccgcgagctgaaacgccaggatcgcattacgccgcat
atcatcagccagatcgtggaatacgccgaaacgcgcaaaggggtgatgatttttgcctcc
accgttgaacacgcgcgtgaaatccacggcctgctgccggcgggcgaagcggcgctggtc
agtgcagaaacgccgccggcagagcgcgacgcgctgatcgaggcgttcaaacaacagcag
ttgcgctatctggtcaacgtcgcagtgctgaccaccggctttgacgcgccgcatgtggat
ttgatcgctattttgcgcccgaccgaatccgtcagcctgtaccagcagatcgtcggccgc
ggcctgcggctggcaccggacaaggaagattgtctgatcctcgattacgccggcaacccg
cacgatctgttcaccccggaggtgggtgtacgcaagccgcacggcgacagccagccggtg
caggtcttttgccccggctgcggctttgccaacctgttctggggcaaatgcaccgaaagc
ggcgagattatcgaacactacggccgccgctgtcagggctggctggaggatgacgacggc
aaccgcgaacagtgcgactaccgcttccgctttaaaagctgcccgcactgcggcgcggaa
aatgatatcgccgcccgccgctgccatcagtgccaggaggtgctggtggatcccgacgat
atgctcaaggccgcgcttaagctgaaagacgcgctagtgctgcgctgcggcggcatggaa
ctgaacagcggccgcgacgataaaggcgaatggctgaaagccacctactatgatgaggac
ggcgccagcgccagcgagcgtttcaggctgcagacgccggcgcagcgcaaagcctttgag
atgctgtttctgcggccgcaccagcgggcgcccggcgtgccgttcaactggcagcaggcg
gccgacgtacttaatcagcaggcgctgctgcgccaccccgactttgtggtggcgcgcaag
cgcggccagttctggcaaatccgggaaaaagtatttgattatcagggccgcttccgccgt
gccgacgccctgtactga
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