Serratia rhizosphaerae: FO014_23835
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Entry
FO014_23835 CDS
T07504
Symbol
rsmF
Name
(GenBank) 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
srhz
Serratia rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
srhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srhz03009
]
FO014_23835 (rsmF)
Enzymes [BR:
srhz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
FO014_23835 (rsmF)
Ribosome biogenesis [BR:
srhz03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
FO014_23835 (rsmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
YebU_pre-PUA_dom
Methyltr_RsmF_N
Methyltranf_PUA
Methyltransf_31
PCMT
TruB-C_2
Rap1_C
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
QHA89772
UniProt:
A0A857EIL6
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All DBs
Position
5087608..5089047
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AA seq
479 aa
AA seq
DB search
MVKAASVFLPPAFLDATRAIMPADLSMDDFIAACQRPLRRSLRVNTLKISVADFLARVSE
YEWQLEPIPWCAEGFWIARDDESLRLGSAAEHLSGLFYIQEASSMLPVSALFAGGETPSR
VLDVAAAPGSKTTQIAALMHNQGGIVANEYAASRVKVLHANISRCGVSNCALTHFDGRVF
GTALPEAFDAILLDAPCSGEGVVRKDPDAMSNWSPESVADIAETQRELIDSAFHALAPGG
VLVYSTCTLNAQENQAVIQSLLASYGDAVSIEPLGELFPGAQQALTAEGFLHVFPQIYDS
EGFFVARLRKHRSVPTLAKPTYKVGKFPFTPMSRKDGELVRQAANAAGLAWDDAAHALWT
RDKEIWLFPRALEALIGKVRFSRIGLKLAERFPKGYRWQHEAAIALADGQGPQAFELDAA
LAQEWYHGRDLYPDAPPQGGECIVTYQQQPLGIAKRIGSRIKNNLPRELVRDGALDFHQ
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
gtggttaaagctgcttccgtatttctgccgccggcgtttctcgacgccacgcgcgccatc
atgcccgccgatctgtcaatggacgattttatcgccgcctgtcaacgcccgttacgccgc
agcctgcgcgtaaatacgctgaaaatcagcgtcgccgattttctggcgcgggtaagcgag
tacgagtggcagttagagcctattccctggtgcgccgaaggcttctggatcgcacgcgac
gatgaaagcctgcggctgggcagcgcggccgaacacctcagcggcctgttttatattcag
gaagccagctccatgctgccggtcagcgcgctgtttgccggcggtgagacgccgagccgg
gtgttggacgtcgccgccgctccgggctcaaaaaccacccagatcgccgcgctgatgcat
aaccaaggcggtatcgtcgccaatgaatacgccgccagccgggtcaaagtgctgcatgcc
aatatcagccgctgcggggtcagcaactgcgcgctgacccattttgacggccgggtgttc
ggcaccgccctgccggaagcctttgacgccatcctgctggacgcgccctgctccggcgaa
ggcgtggtgcgtaaagaccccgatgccatgagcaactggtcgccggagagcgtcgccgac
atcgccgaaacacagcgtgagctgattgacagcgcgttccatgcgctagcgccgggcggc
gtgctggtctactccacctgcacgctgaatgcgcaggagaaccaggcggtgatccagagc
ctgctggccagctatggcgatgcggtcagcatcgagccgctgggcgagctgttccccggc
gcgcaacaggcgctgacggcggaaggtttcctgcacgtgttcccgcaaatctacgacagc
gaaggcttttttgtcgcccgcctgcgcaagcaccgctcggtgccgacgctggcgaaaccg
acctataaagtgggcaaattccccttcacgccgatgtcgcgcaaagacggcgagctggtg
cgtcaggctgccaacgccgccggtctggcctgggatgacgccgcccatgccctgtggacg
cgtgacaaagagatctggctgttccccagggcgctggaagcgctgatcggcaaagtgcgc
ttctcacgcatcggcctgaagctggccgagcgcttccccaaaggctatcgctggcagcat
gaggcggcgattgcgctggcggacggccaggggccgcaggcctttgaactggacgccgca
ctggcgcaggagtggtatcacggccgcgatctgtatccagacgcgccgccgcagggcggt
gagtgcatcgtcacctaccagcaacagccgctgggcatcgccaaacgcatcggcagccgg
ataaaaaacaacctgccccgggaactggtgcgcgacggcgcgctcgatttccatcagtaa
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