Streptomyces rochei: SRO_3285
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Entry
SRO_3285 CDS
T06265
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
srj
Streptomyces rochei
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Gene cluster
GFIT
Motif
Pfam:
BACON_2
Sigma70_r4_2
zf-HC2
S-l_SbsC_C
Motif
Other DBs
NCBI-ProteinID:
BBC94461
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Position
complement(3660846..3662639)
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AA seq
597 aa
AA seq
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MSSSPETTTRTTGAHRAHGVAREAREAREGREPREGVRRPGASESHETCEAHDARDARDA
RETRDRAAARTIARRESTRYESYLDGLFTYCLSILCDHDTATAALGDALALAERRAHRGP
GTDGERRAWLYALARWACLRKLAEAKQKRQATHAAGRTGKAAAKSGRGGRGMDPEAPGPA
LPPELQERRHRELTLLAWPEAAGTTPEQREALELAVRHRLTAPEVAAVLGVAPAAARDLL
ATAACEVERTRAALAVVESGGCPSVAHLTGDSRLILSTALRRELVRHVDDCPRCRRSAER
AAPGRWPGTTVTPAELPVLEAPRAALVPRSRAKVADAPRFDRRGFPMDPRDRAARRDRLR
SRAVTTTVVATVVAAPVLALWAAYRGAPTGEPDAHPGTAREARGPDAIGGNGTGGGYENA
GSASVKPGAGKDGKPDVSVEVMSVAPGTADGSTGSLSVTAANDGDTTLITLTATGTQPVR
WSAVTGSAWLYLSQSSGTLASGESVTLKAYVDHLHEPRGAWRARISIAPAGAVVTITGSG
PLPTPPPPPTPTPTSPSTSPPPTPPTPSSTPTDPPPSTSPTPTPSGTTTETPTPSGS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagcccggagaccaccacccgcaccaccggcgcgcaccgggcgcacggcgtg
gcgcgcgaagcacgagaggcgcgcgaggggcgtgaaccgcgcgagggtgtgcggaggcct
ggtgcgtctgagtcacatgaaacgtgtgaggcgcatgacgcgcgggatgcgcgagacgcc
cgtgagacgcgggaccgtgccgccgcgcggaccatcgcccggcgggagtcgacgcgctac
gagtcgtatctggacggcctgttcacctactgcctgtccatcctgtgcgaccacgacacg
gccaccgccgcgctcggcgacgccctcgccctggccgagcggcgggcccaccgcgggccg
gggaccgacggggagcgcagggcctggctgtacgcgctggcccggtgggcgtgtctgcgc
aagctggccgaggcgaagcagaaacgtcaggccacccatgcggcgggccgtaccggcaaa
gccgcggcgaagagcgggaggggcggcaggggaatggaccccgaggcgcccggcccggcc
ctccccccggagctccaggagcgccggcaccgcgaactgaccctgctcgcctggccggag
gcggccggaaccacgcccgagcagcgcgaggccctggagctcgccgtccgccaccgtctg
accgcccccgaggtcgccgccgtcctcggcgtggcaccggccgccgcccgcgatctgctc
gccacggccgcctgcgaggtcgagcggacccgggccgcgctcgccgtggtggagtccggc
ggctgcccgagcgtcgcccatctcaccggcgacagcaggctgatcctcagcaccgcgctc
cgccgtgagctggtacggcatgtcgacgactgcccgcgctgccggcgcagcgccgaacgc
gcggcccccggccgctggcccggcaccacggtcacccccgccgagctgcccgtcctggag
gcgccccgcgcggccctcgtcccgcgctcccgggcgaaggtcgcggacgcgccccgcttc
gaccggcggggcttcccgatggaccccagggaccgcgcggcccgccgcgaccggctgcgg
tcccgcgcggtgacgacgacggtggtggcgacggtggtggcggcgccggtgctggccctg
tgggcggcgtaccggggcgcgccgacgggggagccggacgcccaccccggcaccgcgcgc
gaggcgcggggcccggacgcgatcggcgggaacggcacgggcggggggtacgagaacgcg
ggcagcgcgagcgtgaagccgggcgcggggaaggacggcaagccggatgtctcggtggag
gtgatgagcgtcgcgcccggtacggcggacggttcgaccgggagtctgtcggtgacggcg
gcgaacgacggcgacaccacgctgatcacgctgaccgcgacgggtacgcagccggtccgc
tggtccgccgtgaccggctccgcgtggctgtatctgagccagtcctcgggcacgctggcc
tccggcgagagcgtgacgctgaaggcgtacgtcgaccacctccacgaaccccggggcgcc
tggcgggcccggatctccatcgcccccgccggcgcggtggtcaccatcaccggctccggc
cccctccccaccccgcccccaccaccgactccgaccccgacctccccctccacctcccct
ccccccaccccaccgaccccttccagcaccccgaccgaccccccgccctccacatccccc
accccgacaccgtccgggacgaccaccgagacaccgactccgtcggggagctag
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