Streptomyces rectiverticillatus: FGW37_17285
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Entry
FGW37_17285 CDS
T06927
Name
(GenBank) PAS domain-containing protein
Organism
srk
Streptomyces rectiverticillatus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_8
PAS_4
Response_reg
PAS_10
HisKA
PAS_7
Motif
Other DBs
NCBI-ProteinID:
QLE73113
LinkDB
All DBs
Position
complement(3942625..3947355)
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AA seq
1576 aa
AA seq
DB search
MSSRPSRGAARLAAILDALPDALLLVNCNGTVVNANHIALETFEVPGTGLVGRGLLSLLP
DFDSRRIPGSMRLPDSDDGRTKPTRMIARRTDGSEFPVEVTSANLEDGRTPYADHQPYTG
DELLMLVVRDLTGTLDTEAELARQQRQTEMILRAAAEGVVGVDTAGKVVLVNPSAAQILG
YRASDLGGRELHPLIHHSRPDGTPFPYEESPIADTLRSGRKHRVRGQALWAKDGRAVPVD
LTTAPVRDGDQLVGAVMTFTDRRAYDALAARHAQLQAVLQESLRGPLEQLRAELGTLAAD
PAGQLWPEANQILHHLSAGYARMTTLVDNVLAYQQLDAGEAKLERETVPLDEVVAAGVEG
AVELIGPGRAQFAVHAPAIEAEVDPERFAHALAHLIADVAGVDATGNAPAGGAPTGDSTI
VVAAAQRGEVVRIEVRGPYAGGDPVHGPLVRGIVRAHGGVLQTHDVPGASGGSAYVLEVP
VSAKGGPVSPAATERRSATDTMTDAMNATTVMPVPSQRARGTAEAPASGGADASAAAGGG
RRARRGADGDTTGDGAAQPAPPAQNDDTPPTGRRRAKPRTDEARPPVPAAAAESDGAAAG
RAARHGRGGPEDASGTGQGGGSGPGSAPGAEPKPAGDGDASGLVPPQGSPAGPTGRRARR
EQPQQAEAPRTAFALPPAEADRTPESAAAAAPTGRRARRALAESPERPIPGQTAAEPSVP
RAAFALPPADADRSREPGGLPGAPRKPADDEGPAVHPDKGRDRSGAGHGEGENAARFPGQ
AQAGRGGTSAFLDTNGPAPAGPGNAPAPFPGQTGPSPADARAPQAPFPAPSGADGPGQGG
TSAFLGTNGPAPAGPGNTPAPFPGQTGRADARTPQAPLPGPAGTDPGQGGTSAFLGTNGP
APAGPRNAPAPFPGQTGPARADARAPQAAFPAPSGTDSPGQGGGTSAFLGTNGPAPAGPG
NAPAPFPGQTGPSPADARAPQAPFPAPVDKGSAPAPFPGQGGPDAQAGRGGTSAFLGTNG
PAPTGRGGAPAPFPGTDGPAPAPTGPDNPGQGGPSTFLGSNGPTPAEAGSAPAPFPGADS
AHPGRGGAPVPFPGRSGPAPAGAENAPAPNSPAPAEAGSAPAPFPGPGGSPAAEAVHGGH
GRTAPSGGGAAPFAGGPAPEGAPASYGATGVRETDPSRSGDPAAGTEQQAAATPAPTGRR
RARRALAEEPGAAAAAAAPGTDTSGRPISVRALGQATPFAQQPGQEPAPGGSGRRRRLGN
PAEGEREREPQAPPQSQPQAPAQPAPRPPLLDAPSGRAFAIGAPDEGSEGPEPLDGPNGA
VEVVNAPRPPMDDELPPEPLDNPRRLLVWPAPDASTEAALTERGYRPVLVHSREEVDAQT
SAYPAALFVDPLTGPITRTALQSLREAAVAAGVPVLVTAGLGQATREAAYGADPAVLLKA
LAPRDSEMHPPRVLLIEEHEPIANALTETLEQRGMQVGRAATDAEAVTLATQMRPNLVVM
DLMQVRRRRAGIVDWLRGNGLLKRTPLVVYTSPEIVDPTQFSRLANGETALFLAERSTSA
EVQGRIVDLLSKVGTD
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaggccatcccgaggcgctgctcgcctcgcagccatactcgacgccctcccc
gacgccctgttgctcgtcaactgcaacggcacggtcgtcaacgccaaccacatagctctc
gagaccttcgaggttcccggcacggggctggtcgggcgcgggctgctctccctgctgccc
gacttcgactcgcgccgcatccccggctccatgcgcctgcccgacagcgacgacggccgc
accaagccgacgcgcatgatcgcccggcgcacggacggttcggagttccccgtcgaggtg
acgagcgcgaacctggaggacggccgcaccccgtacgccgaccaccagccctacacgggc
gacgagctgctcatgctcgtcgtccgcgacctgaccggcacgctcgacaccgaggccgaa
ctcgcccggcagcagcggcagaccgagatgatcctgcgcgccgccgcggagggcgtcgtc
ggcgtcgacaccgcgggcaaggtcgtgctggtcaacccctccgccgcacagatcctcggc
taccgcgccagcgacctcggcggccgggagctccacccgctgatccaccactcccggccg
gacggcacgccgttcccgtacgaggagtccccgatcgccgacacgctgcgctcggggcgc
aagcaccgggtgcgcgggcaggcgctgtgggccaaggacggccgggcggtccccgtcgac
ctcaccaccgcgcccgtgcgcgacggcgaccagctcgtcggcgcggtgatgaccttcacc
gaccgccgggcgtacgacgcgctcgccgcgcgccacgcccagctgcaggccgtcctgcag
gagtccctgcgcggcccgctggagcaactgcgcgccgagctcggcaccctggccgccgac
ccggccggccagctgtggcccgaggccaaccagatcctgcaccacctgtccgccgggtac
gcccggatgacgacgcttgtcgacaatgtcctcgcctatcagcagctggacgccggcgag
gccaagctggagcgggagaccgtcccgctcgacgaggtcgtggccgcgggcgtcgagggc
gcggtcgagctgatcggccccgggcgggcacagttcgcggtgcacgcacccgccatcgag
gccgaggtcgaccccgagcggttcgcccacgccctggcgcacctgatcgcggacgtcgcg
ggcgtcgacgccacgggcaacgcgcccgcgggcggcgcgccgaccggcgactccacgatc
gtcgtcgcggcggcacagcgcggcgaggtcgtacggatcgaggtgcgcggcccctacgcg
gggggcgaccccgtccacgggcccctcgtgcgcggcatcgtgcgggcgcacggcggcgtg
ctgcagacccacgacgtgccgggcgcgtcgggcggcagcgcgtacgtcctggaggtgccc
gtctccgcgaagggcgggcccgtcagccccgccgccacggagcggcgctccgccacggac
acgatgacggacgcgatgaacgccaccaccgtcatgccggtgccgtcccagcgggcgcgc
ggcacggcggaggcacccgcgtccggtggcgccgacgcctccgctgcggcgggcggcggg
cggcgggcgcgccggggcgcggacggcgacaccacgggcgacggcgccgcgcagccggcg
ccgcccgcgcagaacgacgacaccccgcccaccgggcggcggcgcgccaagccgcgcacc
gacgaggcccggccgccggtgcctgcggcggcggccgagagcgacggcgctgccgcgggc
cgggccgcccggcacgggcgcggcgggcccgaagacgcctccggtacgggtcagggcggc
gggtccggccccggctcggcgccgggggcggagccgaagccggccggtgacggcgacgcg
agcggcctcgtaccgccgcagggctcgccggccgggccgacgggccggcgcgcgcgccgg
gaacagccgcagcaggccgaggcgccgcgcacggcgttcgccctgcctccggccgaggcc
gaccgcacgcccgagtccgccgccgcggccgcccccaccgggcgccgggcacgccgggcc
ctcgcggagtcccccgagcgcccgatccccggccagaccgccgcggaaccgtccgtcccg
cgcgcggccttcgcccttcccccggccgacgccgaccgctcccgcgagcccggcggcctg
ccgggagccccccgcaagcccgccgacgacgagggccctgcggtccacccggacaagggc
cgcgaccggagcggcgccgggcacggcgagggggagaacgcggcccggttcccgggccag
gcccaggcgggacggggcggcacgtcggccttcctggacacgaacggccccgcccccgcc
ggcccggggaacgcccccgcgcccttcccgggccagaccggcccctcacccgccgacgcg
cgggcgccccaggcaccgttccccgccccgagcggcgcggacggccccggacagggcggc
acgtccgccttcctcgggacgaacggccccgcccccgccggcccggggaacactcccgcg
ccgttcccgggccagaccgggcgcgccgacgcgaggacaccccaggcaccgctccccggc
ccggccggcacggaccctgggcagggcggcacgtccgccttcctcggaacgaacggcccc
gcccccgccggtccgaggaacgcccccgcgcccttcccgggccagaccgggcccgcgcgc
gccgacgcgcgggcgccccaagcagcgttccccgccccgagcggcacggacagccctggc
cagggcggcggcacgtccgccttcctgggcacgaacggccccgcccccgccggcccgggg
aacgcccccgcgcccttcccgggccagaccggcccctcacccgccgacgcgcgggcgccc
caggcaccgttccccgcgcccgtggacaagggaagcgccccggcgccgttcccgggccag
ggcggccccgacgcccaggccgggcgaggcggcacgtccgccttcctggggacgaacggc
cccgcacccaccggcaggggaggcgcccccgcgcccttccccggcaccgacggacccgcg
cccgcacccaccggcccggacaaccccgggcagggcggcccgtccaccttcctcgggtcg
aacggccccacccccgcggaggcgggaagcgcacccgcgcccttccccggcgcggacagt
gcccaccccggacgcggcggcgctccggtcccgttcccgggccggagcgggcccgcgccc
gccggtgcggagaacgcccccgcgccgaacagtcccgcacccgcggaagcgggaagcgca
cccgcgcccttccccggcccgggcgggagcccggctgccgaggccgtccacggcgggcac
ggccggaccgctccgagcggcggcggcgcagcgccgttcgccggcgggcccgcgccggaa
ggcgcccccgcgtcgtacggcgccacgggcgtgcgcgagaccgacccgtcccgctcgggc
gaccccgctgccggcacggagcagcaggccgcagccacccccgccccgacgggccgccgc
cgcgcgcgccgcgccctggcggaggagcccggcgcggccgcagccgccgcggcgcccggc
acggacacctcggggcgcccgatcagcgtgcgcgccctgggccaggccacgccgttcgcc
cagcagcccggccaggagccggcgccgggcggttcgggccgccgccggcggctcggaaac
ccggccgagggcgagcgcgagcgcgagccgcaggcaccccctcaaagccagccgcaggca
ccggcgcagccggcgccgcgcccgcccctgctcgacgccccgtcaggtcgtgccttcgcc
ataggagctccggacgagggttcggaggggcccgagcccctcgacggccccaacggtgcg
gtggaagtcgtgaacgcgccgcgcccgccgatggacgacgagctgccccccgagccgctg
gacaacccgcgccggctcctcgtatggcccgctccggacgcgtccacggaggcggcgctg
accgagcgcggctaccggccggtgctcgtgcactcgcgcgaggaggtcgacgcgcagacg
tcggcgtacccggcggcgctgttcgtggacccgctgacggggccgatcacgcgcacggcg
ctgcagtcgctgcgcgaggcggccgtcgcggccggggtcccggtcctggtgacggccggg
ctggggcaggcgacgcgggaggcggcctacggggcggacccggcggtactgctgaaggca
ctggcgccccgcgacagcgagatgcacccgccgcgcgtgctgctgatcgaggagcacgag
ccgatcgcgaacgccctgacggagacgttggagcagcgcggcatgcaggtgggccgcgcg
gcgacggacgccgaggcggtgacgctggcgacgcagatgcgcccgaacctggtggtgatg
gacctgatgcaggtgcgccgccgccgcgcgggcatcgtcgactggctgcgcggcaacggc
ctgctcaagcgcacgccgctggtcgtctacacctcgcccgagatcgtcgacccgacgcag
ttctcgcggctggccaacggggagacggcgctcttcctggcggagcggtcgacgagcgcg
gaggtgcagggccggatcgtggacctgctgtcgaaggtgggcacggactga
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