Serratia plymuthica 4Rx13: SOD_c00240
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Entry
SOD_c00240 CDS
T02710
Symbol
tag
Name
(GenBank) DNA-3-methyladenine glycosylase 1
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SOD_c00240 (tag)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srl03400
]
SOD_c00240 (tag)
Enzymes [BR:
srl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
SOD_c00240 (tag)
DNA repair and recombination proteins [BR:
srl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SOD_c00240 (tag)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
HhH-GPD
Osmo_MPGsynth
Motif
Other DBs
NCBI-ProteinID:
AGO53060
LinkDB
All DBs
Position
complement(25170..25736)
Genome browser
AA seq
188 aa
AA seq
DB search
MASERCGWVTADPLYLDYHDKEWGAPTTAARELFEMLCLEGQQAGLSWITVLKKRENYRR
AFHNFDPQRVAAMTEQDVETLLQDSGIIRHRGKIEAIIANARAYLAMEAAGEDFSAFIWG
FVGGEPQLNGWQALSQVPAKTELSDALSKALKKRGFKFIGSTICYAFMQACGLVNDHLTG
CICYPKQK
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgaacgttgcggttgggtgacggcagatccgttatatctcgactatcacgat
aaagaatggggcgcaccgaccaccgctgcgcgtgaactgtttgaaatgctgtgcctggaa
ggccagcaagccgggctttcctggatcaccgtgctgaaaaagcgtgaaaattaccgtcgc
gccttccacaatttcgatccgcaacgggtggcggccatgaccgagcaggacgtggaaacg
ctgctgcaagacagcggtatcatccgccatcgcggcaaaatcgaagccatcatcgccaac
gccagagcctatctggccatggaagcggccggcgaagatttttccgcctttatctggggc
tttgtcggcggcgagccacagctcaacggctggcaagcgctgagccaggtgccggcgaaa
accgagctgtccgatgccttgtccaaagcgttgaaaaaacgcggcttcaaatttataggc
tccaccatctgttacgcctttatgcaggcctgcgggttggtgaacgatcatctgaccggg
tgtatttgctacccaaagcagaaatga
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