Serratia plymuthica 4Rx13: SOD_c25390
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Entry
SOD_c25390 CDS
T02710
Symbol
oppD1
Name
(GenBank) oligopeptide transport ATP-binding protein OppD
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl01501
beta-Lactam resistance
srl02010
ABC transporters
srl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SOD_c25390 (oppD1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SOD_c25390 (oppD1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SOD_c25390 (oppD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srl02000
]
SOD_c25390 (oppD1)
Transporters [BR:
srl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
SOD_c25390 (oppD1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_29
ABC_ATPase
DUF87
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
AGO55513
LinkDB
All DBs
Position
complement(2850196..2851212)
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AA seq
338 aa
AA seq
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MSTIENPQLQTSAVAKSPLLLDVKDLRVTFGTPDGDVTAVNDLNFDLRAGETLGIVGESG
SGKSQTAFALMGLLASNGRIGGSAKFNGREILNLPEKQLNKLRAEEISMIFQDPMTSLNP
YMRVGEQLMEVLMLHKKMSKSEAFEESVRMLDAVKMPEARKRMRMYPHEFSGGMRQRVMI
AMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICNKV
LVMYAGRTMEYGSARDVFYHPSHPYSIGLLNAVPRLDAEGEALMTIPGNPPNLLRLPKGC
PFQPRCQFAMEQCASAPPLEQFGEGRLRACFKPVEALV
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccattgaaaacccgcagttgcaaaccagtgccgtcgccaaatcgccgctgtta
ctggatgtaaaagacctgcgcgtgaccttcggcaccccggacggtgacgtgacggcagtg
aacgatctgaacttcgacctgcgagccggtgaaacgctgggcatcgtcggtgagtccggt
tcgggcaaatcccagaccgctttcgcgctgatggggctgttggccagcaacggccgcatc
ggcggctcggctaaatttaacggccgcgaaatcctcaacctgccggaaaaacagctcaac
aagcttcgggcggaagagatttcgatgatcttccaggatccgatgacgtcgcttaatcct
tatatgcgcgttggcgagcaactgatggaagtgctgatgctgcataaaaaaatgagcaaa
agcgaagccttcgaagagtcggtgcgtatgctcgatgcggtgaaaatgccggaagcgcgc
aagcgcatgcgcatgtatccgcatgagttctccggcggtatgcgccagcgggtgatgatc
gccatggcgttgctgtgtcggcccaaactattgattgccgatgaaccgaccaccgcactg
gatgtgacggttcaggcgcagattatgacgttgttgaatgaactgaaacgcgagttcaac
acggccattatcatgatcacccacgatttgggcgtggtggccggtatctgcaataaggtg
ctggtcatgtacgcagggcgcacgatggaatacggcagcgcgcgtgatgtgttctatcac
ccgagccacccttattccatcggtctgttgaatgcggtaccgcgtttggacgctgaaggt
gaagccttgatgaccattcccggcaacccgccgaatctgctgcgtttgccgaaaggttgc
ccgttccagccgcgttgtcagttcgctatggaacaatgtgcgagcgctccgccgttggag
cagtttggtgaagggcgcctgcgcgcctgctttaaaccggtggaggcgttggtatga
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