Serratia plymuthica 4Rx13: SOD_c31660
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Entry
SOD_c31660 CDS
T02710
Symbol
yejH
Name
(GenBank) YejH
KO
K19789
DNA repair protein RadD
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srl03400
]
SOD_c31660 (yejH)
DNA repair and recombination proteins [BR:
srl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
SOD_c31660 (yejH)
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Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_16
zf-tcix
zinc_ribbon_2
zf-ribbon_3
AAA_22
SLFN-g3_helicase
AAA
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AGO56134
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Position
3548150..3549907
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AA seq
585 aa
AA seq
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MAFTLRPYQLEAVEATIKHFRQHSQPALIVLPTGAGKSLVIAELAKRARGRVLVLAHVKE
LVAQNHAKYCAYGLEADIFAAGLQQKDSAGKVVFGSVQSVARNLSLFDGAFSLLIIDECH
RISDDDDSQYQQIIQHLQKSNPQLRLLGLTATPYRLGKGWIYQYHYHGFTRGDAGSLFRD
CIYELPLRYMIKHGYLVPPERLDMPIVQYDFSRLEARSNGLFSEVDLNRELKQQNRITPH
IISQIVEYAETRKGVMIFASTVEHAREIHGLLPAGEAALVSAETPAAERDALIEAFKQQR
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKEDCLILDYAGNP
HDLFTPEVGVSKPHSDSQPVQVFCPGCGFANLFWGKCTENGDIIEHYGRRCQGWLEDDDG
HREQCDYRFRFKSCPHCGAENDIAARRCHQCQEVLVDPDDMLKEALKLKDALVLRCGGME
LQSGRDEKGEWLKATYYDEDGTSTSERFRLQTPAQRKAFEMLFLRPHQRAPGVPFSWQTA
ADVLAQQTLLRHPDFVVARKRGQFWQVREKVFDYQGRFRRANELY
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcctttactctacgcccctaccaactggaagcggtcgaagccaccatcaaacatttc
cgccagcactctcaaccggcgctgattgtgctgccgaccggtgcaggcaaaagtctggtg
atcgccgaactggcgaagcgcgcacgcggccgggtattggtgctggcccacgtgaaagag
ctggtggcgcaaaaccacgccaaatactgcgcctacgggctggaggcggatatctttgcc
gccgggctgcagcaaaaagacagcgccggcaaagtggtgttcggcagcgtacagtccgtg
gcgcgtaatctgtcgttgttcgacggcgcattttccctgctgattatcgacgagtgccac
cgcatcagcgacgacgatgacagccagtaccagcaaattattcagcatctgcaaaaatcc
aacccgcagttgcggctgttgggactgaccgccacgccttaccggctgggtaaaggctgg
atttatcagtatcactaccacggctttacccgcggcgatgccggtagcctgtttcgcgac
tgcatttatgaactgccgctgcgctacatgatcaagcacggttatctggtgccgccggaa
cggctcgacatgccgattgtgcagtacgatttcagccgcctggaggccagaagcaacggc
ctgttcagtgaggtggacctcaaccgcgagctgaaacagcaaaatcgcatcacgccgcac
atcatcagccagatcgtcgaatatgccgaaacgcgcaaaggggtgatgattttcgcctcc
accgttgagcatgctcgtgagatccacggcctgctgccggccggtgaggccgcgctggtc
agcgccgaaacgccggccgccgaacgggatgcgttgattgaggcgttcaaacaacaacgg
ctgcgctatctggtcaacgtggcggtgttgaccaccggctttgacgcgccgcatgtcgat
ctgatcgccattttgcgccccaccgaatccgtcagcctttatcagcaaatcgtcggccgc
gggctgcggctggctcccggcaaagaggattgcctgatcctcgactacgccggcaacccg
catgacctgtttacgcctgaggtgggcgtcagcaaaccgcacagcgacagccagccggta
caggtattctgccccggctgcggcttcgccaacctgttctgggggaaatgcaccgaaaat
ggcgacatcatcgagcattacggccgccgctgccagggctggctggaagacgatgatggc
catcgcgaacagtgcgactaccgctttcgtttcaagagttgcccgcactgtggcgcagaa
aacgacattgctgcgcgccgctgccaccagtgccaggaagtgctggtcgatcccgacgat
atgctgaaagaggcgctgaaactgaaggacgcattggttctgcgctgcggcggtatggag
ttgcaaagcggacgcgatgaaaaaggcgagtggctgaaggcgacctattacgatgaagac
ggcaccagcaccagcgagcgtttccgcctgcaaacgccggcgcagcgcaaagccttcgag
atgctgtttctgcgcccgcatcaacgcgccccgggggtaccgttcagttggcaaaccgca
gccgacgtgctggcccaacagactctgttgcgtcatccggattttgtcgtggcgcgcaaa
cgtgggcaattctggcaggtacgggaaaaagtgttcgattatcaaggccgcttccgccgg
gccaacgagctgtattga
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