Serratia plymuthica 4Rx13: SOD_c39270
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Entry
SOD_c39270 CDS
T02710
Symbol
speB
Name
(GenBank) agmatinase SpeB
KO
K01480
agmatinase [EC:
3.5.3.11
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00330
Arginine and proline metabolism
srl01100
Metabolic pathways
Module
srl_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SOD_c39270 (speB)
Enzymes [BR:
srl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.3 In linear amidines
3.5.3.11 agmatinase
SOD_c39270 (speB)
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Gene cluster
GFIT
Motif
Pfam:
Arginase
Motif
Other DBs
NCBI-ProteinID:
AGO56878
LinkDB
All DBs
Position
complement(4424939..4425859)
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AA seq
306 aa
AA seq
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MSTLGHQSDNSLVSNAFGFLRFPLNFMPYDSDAEWVITGIPFDMATSGRAGGRHGPAAIR
QVSTNLAWEGNRWPWSFDLRDRLNVVDCGDIVFNFGDAQDMSDKLQAHAEKLLKAGKRML
SFGGDHFVTLPLLRAHAKHFGKLALVHFDAHTDTYANGSKYDHGTMFFHAPNEGLIDPNR
SVQIGIRTEFDHDNGFTVLDAAQVNDRSVDDLLTQIKQIVGDMPVYLTFDIDCLDPAFAP
GTGTPVIGGLTSDRALKLVRGMQSLNIVGMDVVEVAPAYDQSEITALAAATLGLEMLYLQ
AAKKHA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgttaggccatcagtccgataattccttagtgtccaacgcctttggtttcctg
cgctttccgctgaatttcatgccttatgacagcgatgcagagtgggtcatcaccggcatt
ccattcgatatggcaacctccggccgcgccggtggccgtcatggccctgcggcgatccgt
caggtttccaccaatctggcgtgggaaggcaaccgctggccgtggagctttgatcttcgc
gatcgtctgaacgtggttgactgcggcgatatcgtgttcaacttcggcgacgctcaggac
atgagcgacaagctgcaggcgcacgcggagaaattgctgaaggccggtaaacgcatgctt
tcattcggcggtgatcacttcgtcacgctgccgctgctgcgcgcgcacgccaaacatttc
ggcaaactggcgctggtgcattttgacgcgcacaccgacacctacgccaacggcagtaaa
tacgaccacggtaccatgttcttccatgcgccgaacgaaggcctgattgatccgaaccgc
tcggtgcagatcggtattcgtaccgagttcgatcacgacaacggtttcaccgtgttggat
gccgcacaggttaacgatcgcagcgtggacgacctgctgacgcagatcaaacagatcgtc
ggcgatatgccggtgtacctgaccttcgacatcgattgcctggatccggccttcgcgccg
ggcaccggcaccccggtgatcggcggcctgacctccgatcgcgcgttgaaactggtacgc
ggcatgcagtcgctgaacatcgtcggcatggacgtggtagaagtggcgccagcctatgac
caatccgaaatcaccgcgctggccgcggcgactctgggcctggaaatgctgtatctgcaa
gcggccaagaaacacgcctaa
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