Salinibacter ruber M8: SRM_p84025
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Entry
SRM_p84025 CDS
T01209
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
srm
Salinibacter ruber M8
Pathway
srm00521
Streptomycin biosynthesis
srm00523
Polyketide sugar unit biosynthesis
srm00541
O-Antigen nucleotide sugar biosynthesis
srm01100
Metabolic pathways
srm01110
Biosynthesis of secondary metabolites
srm01250
Biosynthesis of nucleotide sugars
Module
srm_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SRM_p84025 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SRM_p84025 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SRM_p84025 (rfbC)
Enzymes [BR:
srm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SRM_p84025 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CBH22831
UniProt:
D6CW02
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Position
pSR84:complement(35873..36454)
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AA seq
193 aa
AA seq
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MSRPTPPMTVSETSLPGVRLIEPDVYMDDRGSFAELWNVRDYGHHGLDVTFVQDNLSRSR
EGVLRGLHFQNPRPQGKLISVLKGAVYDVVVDVRAGADTFGAWEGQVLSAENARQLYVPE
GYAHGFVATSGEVLFHYKCTDFYHPEADRTVRWDDPALGIDWPTEDPILSEKDAGAPALD
EIPREALRFDDVR
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccggcccacccctccgatgaccgtttccgagacctctcttcccggcgtgcgcctg
atcgagccggacgtctacatggacgatcgcggctcgttcgccgagctgtggaacgtgcgg
gactacggccaccacggcctcgacgtcacgttcgtgcaggacaacctgtcccggtcccgc
gaaggggtgctgcgggggctgcacttccagaacccccggccgcaggggaagctgatctcg
gtgctgaagggggccgtctacgacgtggtcgtcgacgtgcgggcgggggcggatacgttt
ggagcgtgggaggggcaggtcctctcggccgagaacgcgcggcagctgtacgtgccggag
ggctacgcccacggcttcgtggcgacgagcggcgaggtcctcttccattacaagtgcacc
gacttttaccacccggaggccgaccggacggtccggtgggacgacccggcccttggcatc
gactggccaacagaagacccgatcctgtcggagaaggatgcgggggcgcctgcgctggac
gaaatcccccgcgaggcccttcggttcgacgacgtgcgatag
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