Streptomyces rubrolavendulae: A4G23_03929
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Entry
A4G23_03929 CDS
T04616
Symbol
ykoV
Name
(GenBank) putative DNA repair protein YkoV
KO
K10979
DNA end-binding protein Ku
Organism
srn
Streptomyces rubrolavendulae
Pathway
srn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
srn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
A4G23_03929 (ykoV)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srn03400
]
A4G23_03929 (ykoV)
DNA repair and recombination proteins [BR:
srn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
A4G23_03929 (ykoV)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
AOT61052
UniProt:
A0A1D8G6G0
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All DBs
Position
4532782..4534041
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AA seq
419 aa
AA seq
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MIPVRKGRTVRSIWNGAISFGLVSIPIKLVNATENRSVSFRQIHTADGGRVRYRKVCELD
GEELPSAEIGKAYEEADGTMIPITDEDLAALPLPTAKTIEIVAFVPASEIDPLQLDAAYY
LAASGVPAAKPYTLLREALKRSERVAIAKFALRGRERLGMLRVVDDVIAMHGLLWPDEIR
QPEGVAPDTAVTVRDAELDLADALMDTLGEVDISTLHDDYREAVEELIAAKAEGAVEVPA
EAKPERGAQVIDLMAALESSVRAAREARGEEAAGEEATGRAAREPAGDQAGRAAGEAAEA
EGGEEGAGGAASVTELRRRTPPKAPAAPKASGGRKSTARTAARTADAAPARKSTAKKTAA
KKAAAKKTAARTTAGTAAKSASKASAKGEGKKAAAARGTSSGATGKTAAKKSTPRRKSA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgattccggtacgaaagggacgaaccgtgcgatccatctggaacggcgcgatctccttc
gggctggtcagcatccccatcaagctggtgaacgcgaccgagaaccgctccgtctccttc
cgccagatccacaccgccgacggcggccgcgtccggtaccgcaaggtgtgcgagctggac
ggcgaggagctcccgtccgccgagatcggcaaggcgtacgaggaggccgacgggacgatg
atcccgatcaccgacgaggacctggccgcgctgccgctgcccacggccaagacgatcgag
atcgtcgccttcgtgccggcgtcggagatcgacccgctccagctcgacgccgcctactac
ctggcggcgagcggggtgcccgcggcgaagccgtacacgctgctgcgcgaggccctgaag
cgcagcgagcgggtggccatcgccaagttcgcgctgcgcgggcgggagcggctcggcatg
ctgcgggtggtggacgacgtgatcgccatgcacggtctgctgtggccggacgagatccgg
cagccggaaggagtcgcgcccgacaccgccgtcacggtccgggacgccgagctggacctc
gcggacgcgctgatggacacgctcggcgaggtcgacatcagcaccctccacgacgactac
cgggaggcggtcgaggagctgatcgccgccaaggcggagggcgccgtcgaggtgcccgcc
gaggcgaagccggagcggggcgcgcaggtcatcgacctgatggcggcgctggagagcagc
gtacgggcggcccgcgaggcccgtggcgaggaagcggccggcgaggaggccaccggtcgg
gcggcccgggagccggccggggaccaggccgggcgggcggccggggaggccgcggaggcc
gaagggggcgaggagggcgccggcggggcggcgtccgtcacggagctgcgccgccgtacg
ccgccgaaggccccggccgcgcccaaggcgagcggcggccggaagtccacggcccggacc
gccgcgaggacggccgacgcggcaccggcgcgcaagtccacggcgaagaagaccgccgcg
aagaaggccgccgccaagaagacggcggcgaggaccacggccgggacggccgcgaagtcc
gcgtccaaggcgtccgcgaagggggagggcaagaaggccgcagccgcccgcgggacgtcg
tcgggcgccacggggaagaccgccgcgaagaagtccaccccgcgcaggaagtccgcctga
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