Skermanella rosea: JL101_001180
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Entry
JL101_001180 CDS
T07666
Name
(GenBank) ribulose bisphosphate carboxylase small subunit
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
sroe
Skermanella rosea
Pathway
sroe00630
Glyoxylate and dicarboxylate metabolism
sroe01100
Metabolic pathways
sroe01110
Biosynthesis of secondary metabolites
sroe01120
Microbial metabolism in diverse environments
sroe01200
Carbon metabolism
Module
sroe_M00165
Reductive pentose phosphate cycle (Calvin cycle)
sroe_M00612
Anoxygenic photosynthesis in purple bacteria
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JL101_001180
Enzymes [BR:
sroe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
JL101_001180
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_small
RVT_1
Motif
Other DBs
NCBI-ProteinID:
UEM04085
LinkDB
All DBs
Position
complement(252572..252988)
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AA seq
138 aa
AA seq
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MRLTQGQFSFLPDLTDDEIKQQITYALSQGWAVAIESTDDPHPRNTYWDMWGTPMFDIVD
AAGVMMEVNACRKANKGKYVKVLAFDASKGFESIRMSFIIDRPAEEKGFELVRAEGPGRQ
VNYTVRSYATEKPMGARY
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgacccagggccagttctcgttccttccggacctgacggacgacgagatcaag
cagcagatcacctacgcgctcagccagggctgggccgtcgcgatcgaatccaccgacgat
ccccacccccgcaacacctattgggacatgtggggcacgccgatgttcgacatcgtcgac
gccgccggcgtgatgatggaggtcaacgcctgccgcaaggcgaacaagggcaaatacgtc
aaggtgctggccttcgacgcgagcaagggcttcgagagcatccgcatgtccttcatcatc
gaccgcccggccgaggagaagggcttcgagctggtccgcgccgagggacccggccgccag
gtcaactacaccgtccgcagctacgcgaccgagaagcccatgggcgcgcggtactga
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