Skermanella rosea: JL101_001730
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Entry
JL101_001730 CDS
T07666
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sroe
Skermanella rosea
Pathway
sroe01501
beta-Lactam resistance
sroe01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JL101_001730
01503 Cationic antimicrobial peptide (CAMP) resistance
JL101_001730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sroe02000
]
JL101_001730
01504 Antimicrobial resistance genes [BR:
sroe01504
]
JL101_001730
Transporters [BR:
sroe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JL101_001730
Antimicrobial resistance genes [BR:
sroe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JL101_001730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
UEM04189
LinkDB
All DBs
Position
complement(364643..367786)
Genome browser
AA seq
1047 aa
AA seq
DB search
MSKYFIDRPVFAWVIAIVIMLAGGLSILGLPIEQYPSIAPPSIRINATYPGASAQTLEGT
VTQVIEQQMNGLDHLRYISSNSDSSGTAQITLTFNPEADPDIAQVQVQNKLQLAMPRLPQ
EVQQQGVQVTKGNNTFLMVMGFVSSDGTMPQDDIADFVASSVQDPISRVTGVGTVTLFGA
QHAMRIWLDPNKLISYGLTTTDVVSAITAQNAEVSAGQLGGAPAVPGQQLNATIIAQTRL
QTPEEFSRILIRVNTDGSQIRLSDVARVEVGAENFTTVARYNGKPAAGMGISLATGANAL
DTAAAVRARIEELKPFFPAGVEVVYPYDTTPFVKLSIEGVVHTLLEAIVLVFAIMYLFLQ
NFRATLIPTIAVPVVLLGTFGVLAAAGFTINTLTMFAMVLAIGLLVDDAIVVVENVERVM
AEEGLSPKEATRKSMGQITGALIGIALVLSAVFVPMAFFGGSTGAIYRQFSLTVVSAMAL
SVVVALILTPALCATMLKPVKGHGQPRKGFFGWFNRTFDRGNAKYQRGVGHMIHRRGRYL
LIYLLIVAGLGVLFVRLPAAFLPNEDQGILLTQMALPPGATLERTLETVEAVERHYLEDE
KDYVNGIFAVAGFSFSGRGQNTAIAFANLKDWEVRGSDEGAVSAIAARAMASLSRVRDAM
IFAFTPPAIIELGNATGFDMQLVDRGGLGHEALMQARGQLLGLAAQNPSLVGVRPNGLDD
NPQLRIDIDREKASALGLSLADINTTLTATWGSSYVNDFIENGRVKRVYLQADAPYRMLP
SDLDRWYMRNAEGEMVPFSTFSTTHWDYGSPRLERFNGVSSINIQGQAAPGVSSGEAMAI
MEDLARQLPQGISFEWQGLSYEERLSGSQAPALYAISILVVFLCLAALYESWSIPASVIL
VVPLGVLGAVIAAHLRGLPNDVYFQVGLLTTIGLSAKNAILIVEFAKDMHDEGMGLLEAT
IEACRQRLRPILMTSFAFILGVLPLAISTGAGSGSQNAIGVGVMGGMISATVLAIFFVPV
FFVAVLKLVARWAPKGRQGTPEPAQAD
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaatacttcatcgacaggccggtcttcgcctgggtgatcgcgatcgtgatcatg
ctggcgggcggcctgagcatcctggggctgccgatcgagcagtacccctcgatcgccccg
ccctcgatccgcatcaacgcgacgtatccgggcgcctcggcccagacgctggaaggcacg
gtgacccaggtcatcgagcagcagatgaacggtctcgaccatctgcgctacatctcgtcc
aacagcgacagctccggcaccgcccagatcaccctgaccttcaacccggaggccgacccc
gacatcgcgcaggtgcaggtgcagaacaagctgcagctcgccatgccgcgcctgccgcag
gaagtgcagcagcagggcgtccaggtcaccaagggcaacaacaccttcctgatggtcatg
gggttcgtgtcgtccgacggcacgatgccccaggacgacatcgccgacttcgtcgcctcc
agcgtccaggacccgatcagccgggtcaccggcgtcggcaccgtgaccctgttcggcgcc
cagcatgccatgcgcatctggctcgacccgaacaagctgatcagctacgggctgaccacg
accgacgtggtgagcgccatcaccgcgcagaacgccgaggtgtcggccggccagctcggc
ggcgccccggcggtgcccggccagcagctgaacgccaccatcatcgcccagacccggctc
cagacgccggaggagttcagccggatcctgatccgggtcaataccgacggctcccagatc
cgcctgtccgacgtggcccgggtcgaggtcggggccgagaacttcaccaccgtcgcgcgc
tacaacggcaagcccgccgccggcatgggcatcagcctggcgaccggggccaacgcgctg
gacacggccgccgcggtgcgggcacggatcgaggagctgaagcccttcttcccggccggc
gtcgaggtcgtctacccctatgacacgactccgttcgtcaagctgtcgatcgagggcgtg
gtgcatacgctgctggaggcgatcgtcctcgtcttcgccatcatgtacctgttcctccag
aacttccgggcgacgctgatcccgaccatcgcggtgccggtggtgctgctggggaccttc
ggcgtgctggcggcggccggattcaccatcaacacgctgaccatgttcgccatggtgctg
gcgatcggcctgctggtcgacgacgccatcgtcgtggtcgagaacgtcgagcgcgtgatg
gcggaggaaggcctgtcgcccaaggaggcgacccggaagagcatgggccagatcaccggc
gcgctgatcggcatagcgctggtcctgtccgccgtgttcgtgcccatggccttcttcggc
ggatcgaccggggccatctaccgccagttctcgctgaccgtggtgtcggccatggcgctg
tcggtggtggtggcgctgatcctgacgcccgcgctgtgcgccaccatgctgaagccggtc
aagggtcacggccagccgcgcaagggcttcttcggctggttcaaccgcaccttcgaccgc
ggcaacgccaagtaccagcgcggcgtcggccacatgatccaccggcgcggccggtacctg
ctgatctatctgctgatcgtcgccggcctgggcgtcctgttcgtccgcctgcccgccgcc
ttcctgcccaacgaggaccagggcatcctgctgacccagatggccctgccgcccggcgcc
acgctggaacggacgctggagaccgtcgaggcggtcgagcgccactacctcgaggacgag
aaggactacgtcaacggcatcttcgcggtcgccggcttcagcttcagcggacgcggccag
aacaccgccatcgccttcgccaacctgaaggactgggaggtccgcggcagcgacgagggc
gccgtcagcgccatcgccgcgcgcgccatggcctcgctgtcccgggtccgcgacgcgatg
atcttcgccttcaccccgccggccatcatcgagctgggcaacgccaccggcttcgacatg
cagctggtcgaccgcggcggcctggggcacgaggcgctgatgcaggcgcgcggccagctc
ctcggcctcgcggcgcagaacccgtcgctggtcggcgtgcggccgaacgggctggacgac
aatccgcagctgcggatcgacatcgaccgcgagaaggcgagcgcgctgggcctgtcgctg
gccgacatcaacacgacgctgacggcgacctggggctccagctacgtcaacgacttcatc
gagaacggccgggtcaagcgtgtctatctgcaggccgacgcgccctaccggatgctgccg
tccgacctggaccgctggtacatgcggaacgccgagggcgagatggtgccgttctccacc
ttctcgaccacccactgggactacggctcgccccggctggaacggttcaacggcgtctcc
tcgatcaacatccagggccaggcggcgccgggcgtcagttccggcgaggccatggcgatc
atggaggacctggcgcgccagcttccccagggcatcagcttcgagtggcagggcctgtcc
tacgaggagcgcctgtccggctcgcaggccccggccctgtacgcgatctcgatcctggtc
gtgttcctgtgcctggccgccctgtacgagagctggtcgatcccggcctcggtcatcctg
gtggtgccgctgggcgtcctgggcgccgtcatcgcggcgcacctgcggggcctgcccaac
gacgtctatttccaggtgggcctgctgacgaccatcggcctgtcggcgaagaacgcgatc
ctgatcgtggagttcgccaaggacatgcacgacgagggcatgggcctgctggaggcgacc
atcgaggcgtgccgtcagcggcttcggccgatcctgatgacgtccttcgccttcatcctg
ggcgtgctgccgctcgcgatcagcaccggcgccggctcgggcagccagaacgccatcggc
gtcggcgtgatgggcggcatgatctcggccaccgtgctggcgatcttcttcgtgccggtg
ttcttcgtggcggtgctgaagctggtcgcccgctgggcacccaaggggcgccagggcaca
cccgaaccggcccaggccgactga
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