Skermanella rosea: JL101_002210
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Entry
JL101_002210 CDS
T07666
Name
(GenBank) tetratricopeptide repeat protein
Organism
sroe
Skermanella rosea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_16
ANAPC3
TPR_14
DpnD-PcfM
TPR_21
TPR_8
Motif
Other DBs
NCBI-ProteinID:
UEM04280
LinkDB
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Position
470401..473439
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AA seq
1012 aa
AA seq
DB search
MTTRLGAALAAAILLAAGLSGGSGPVAAQQPAPAGSGPAAAEAVVRVRAGVHPDRNRLVF
DWPGAVDYSVARRGDTVQITFSRPGQADFSRLQRVRLRNVPTVGQAAVDGRLVVQVSIPP
GSEVKDFRTGAGGVALDIVDPPRREAAAPATPAAPTPAATPAPAQPAAPVPAKAPAPAPA
PAAPVKSERPPAPLPQPQAAAPASRAVPEPPPPSTAPLQPVAAQPLSPGGAETWRGTVTV
EAQEPAAAAVYVRAGYLYAVFGRPLDLEGRVRVDALIPGLGGPETVPMRGATAFRMAVPD
GLEPTVSRDGNTWRIALAQRAATRPEGLPVDAQRDFPLGARLVVGVPDARQVIQMNDPVA
GDQLLLVPLPNPGQAVVEPHGFAQLRLLPAAQGIVVQPLEDTVAVRPIRDGVEVTTAGGL
MLSPPGDLVGVSPTRLSGRGREVQSPTGLFDLAGWKRGPSGDFNKLRQEVQRAVVTAPEA
ERDRARMDLAHFYFAHGYAAESLGLLGLLAGNQPDLETRPEFLAIRGAARLLYGDPQSAA
DDLANPALDGKEEAILWRAAVAAERGDWPAAARDFDRARAQLDGYPDPFFTKLAALAVDA
RIRTGDRTGAARLLDTLAQRTGGNFERRPAGQFRRAQLQQLAGDKDGAAASFLAAASGTD
RLYRTRAELALVDIELEQGKLTPADAAARLERLRFAWRGDDLELDILQRLGETYMKANNY
AEGFNTIRQAVALFPESPRAAELSRGLSDSFANLFIKDGAAALPPVEALGLYDQFKDLAP
EGPRGDLVVRMLAERMVEIDLLGRAGDLLQAQVAGKLQGAEKGEVGARLAEIRLQDGRPD
QALSALDQSEVPDLSAEMVARRRVLRARALAELKRYGEAVALLKEDSSQSAELMRVDIAW
RGAQWAEAAAGLAKVIGPPPPAGTPLSKDKADLVLNQAVALSLAGDSAGLDRLRGQFTAA
MDGTPHADTFRVLARPGQSGGLVDLASIQSRVKEVGTFQKFLSGRQGGQAVN
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgacaacccggctgggggcggcactggcggccgcgattctgctcgccgccgggttgtcc
ggaggctccggtccggtcgcggcgcagcagcccgcccccgcgggttccggcccggcggcc
gccgaggcggtggtccgggtccgcgcgggcgtgcatcccgaccgcaaccggctggtgttc
gactggccgggagcggtcgactattccgtcgcccggcggggcgataccgtccagatcacc
ttctccaggccggggcaggccgatttctcgcggcttcagcgagtccgcctgcgcaacgtg
ccgacggtcgggcaggcggccgtcgacggccggctggtcgtgcaggtcagcatcccgccc
ggcagcgaggtcaaggatttccgcaccggggccggcggcgttgccctcgacatcgtcgat
ccgccccgccgggaagccgccgcgccggccacgcccgcggcccccacgcccgcggcgacg
ccggcccccgcccagcccgccgctccggtgccggccaaagctccggctccggctccagct
ccagccgccccggtgaaatcggaacgaccgccggcaccgctgccccagccgcaggctgcg
gctccggcttcccgcgcggtgccggagccgccgccgccctcgacggccccgctccagccc
gttgcggcgcagccgctgtccccgggcggcgccgagacctggcgcggcaccgtgacggtg
gaggcgcaggagcccgcggcggcggccgtctatgtccgcgccggctatctctacgccgtg
ttcggaaggccgctggacctggagggccgcgtcagggtggatgccctgattcccgggctc
ggcgggccggagacggtgccgatgcggggcgccaccgccttccgcatggccgtgcccgac
gggctggagccgaccgtgtcgcgcgacggcaatacctggcggatcgcgctggcccagcgt
gccgccacccggcccgaagggttgccggtcgatgcccagcgcgatttcccgctcggcgcc
cggctggtggtcggcgtgcccgacgcccggcaggtgatccagatgaacgacccggtggcg
ggggaccagctcctgctggtgccgctgcccaatccggggcaggccgtggtcgagccgcac
gggttcgcccagctccgcctgttgccggccgcgcagggcatcgtggtgcagccgctggag
gatacggtcgcggtccggccgatccgcgacggcgtcgaggtgaccaccgccggcggcctg
atgctgtcgccgcccggcgacctggtcggcgtctcgccgacccgcctgagcggacggggc
cgcgaggtccagtctccgaccgggctgttcgacctggcgggatggaagcgcggccccagc
ggcgacttcaacaagctgcgccaggaggtccagagggcggtcgtcacggcgcccgaggcc
gaacgcgaccgggcccgcatggacctcgcgcatttctacttcgcccacggctacgccgcg
gagagcctaggcctgctgggattgctcgcgggcaaccagcccgacctggagacccgtccc
gagttcctggcgatccgcggcgccgcccggctgctctacggggacccgcagtcggctgcc
gacgatctcgccaacccggcgctcgacggcaaggaggaggcgatcctgtggcgagccgcg
gtggcggcggagcggggcgactggccggcggcggcgcgcgacttcgaccgcgcccgtgcc
cagctcgacggctatccggatccgttcttcaccaagctggctgccctggcggtggacgcc
cgcatccgcaccggcgaccggaccggcgccgcccgcctgctggataccctggcgcagcgg
accggcgggaatttcgagcgcaggccggccgggcagttccggcgcgcccagctccagcag
ctcgccggcgacaaggacggtgccgcggcctccttcctcgcggcggcaagcggcaccgac
cggctctaccggacccgggccgagctggccctggtcgatatcgagctggagcagggcaag
ctgacgccggccgacgcggcggcgcggctggagcgcctgcgcttcgcctggcgcggcgac
gacctggagctggacatcctccagcgcctgggcgagacctacatgaaggcgaacaactac
gccgagggcttcaacacgatccggcaggccgtcgccctgttccccgaaagcccgcgggcc
gccgaactgtcccgcggactgtccgacagcttcgccaacctgttcatcaaggacggtgct
gcggcgctcccgccggtcgaggcgcttgggctgtacgaccagttcaaggacctcgccccc
gaggggccgcgcggcgacctggtggtccgcatgctggccgagcggatggtcgagatcgac
ctgctcgggcgcgccggggacctgctccaggcccaggtcgcgggcaagctccagggggcg
gagaagggcgaggtgggcgcccggctggccgagatcaggcttcaggacggcaggcccgac
caagccctgtcggcgctcgaccagtccgaggttcccgacctgtccgcggagatggtggcc
cggcggcgcgtgctgcgcgcccgcgccctggccgagctgaagcgctacggcgaggcggtg
gcgctcctgaaggaggactccagccagtcggcggaactgatgcgggtggatatcgcatgg
cgcggcgcccagtgggccgaggcggcggccggtctcgccaaggtgatcggtccgccgcca
ccggccggcacgccgctttccaaggacaaggccgacctggtgctgaaccaggcggtggcc
ctgtccctggccggcgacagcgccgggctcgaccggctgcgcggccagttcaccgcggcc
atggacgggacgccccacgccgacaccttccgcgtgctggcccgtccggggcagtccggc
ggtctggtcgacctggcctcgatccagtcccgcgtcaaggaagtcgggaccttccagaag
ttcctctccggccgccagggcgggcaggcggtgaattga
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