Skermanella rosea: JL101_005015
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Entry
JL101_005015 CDS
T07666
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sroe
Skermanella rosea
Pathway
sroe01501
beta-Lactam resistance
sroe01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JL101_005015
01503 Cationic antimicrobial peptide (CAMP) resistance
JL101_005015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sroe02000
]
JL101_005015
01504 Antimicrobial resistance genes [BR:
sroe01504
]
JL101_005015
Transporters [BR:
sroe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JL101_005015
Antimicrobial resistance genes [BR:
sroe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JL101_005015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Patched
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
UEM04800
LinkDB
All DBs
Position
complement(1065954..1069103)
Genome browser
AA seq
1049 aa
AA seq
DB search
MLSSVFIDRPRLAMVISIVIVLAGLLALTRIPVAQFPDIVPPQVSVTTLYPGANAETVEA
TIAQPIESQVNGVQDMIYMSSTSGNDGSYTLTVTFAVGTDPDINTVNVQNRVRLAEASLP
EEVARQGVQVRQQSSAFLQLISLVSESPEYDELFLNNYARINLLDEISRVSGVGEARLFS
EYDYSMRVWLETDRLTSFGLSPNDVVAAIRSQNVQAAVGQLGAQPQPSGQQLEFSLQAAG
RLTEVAQFENIVLRADADGSLLRLSDVARVELAARSYSSAGTSNGRPAAVLGIYQAPGAN
AVTTAQEVLRVLDRLEERFPEGVHYEVTYDTTVFVTASIEEVVTTLVEAFVLVLVVVFVF
LGNWRATIIPMLAVPVALIGTFAFLLMFGQSANTISLFAMVLAIGIVVDDAIVVVENVER
VMRDENLPAPEATRKAMGQITPAIIAITLVLLSVFIPVGFIPGITGSLYAQFALTVSVAM
LLSAINALTLSPALCALLLKPHEKHGRIMGWIQDRIDNVRNGYSRLVNRLVRMAILSLVV
VAAAFGGYFGLSAIVPAGFLPDEDQGALFMELRLPQNAALNRTQVVVRDVEGLVRDIPGV
RSVTAVAGFSLLDSLQAGNAAFMVVLLDPFEERTEAGTTAFDVLAQIRQRTATVPNAQIL
AFNLPPISGLGNTAGFDFRLQDLTGGEPAQLAAAAGGLVVAANQDPALAQVFTTYRVDTR
RLFVEVDREKAQALGVQVSDVYNALQTTLGGFYVNDFNRFGRTWQVNVQAEAKDRDQVED
LWRIHVRSADGAMVPLRSLASVRFQLGPQAINRYNNYRSVAIQGSPAPGYSSGGALSAMA
SVADRTLPPGFSFAWSGISLQEQEAAGQTPIILALAVLFAYLFLVALYESWTIPIAVLLS
VSVGLCGAMLALMATGLANDVYAQIGIVVLIALASKNAILIVEFAKEQREAGASIRDAAR
EGARLRFRAVIMTSLAFIFGLIPLVTAVGAAAASRRGVSTAVFGGMIAASSLGLFVIPML
YVVIQSMREWTTRRVRGQPRRPESPAPAE
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgctctcctccgtcttcatcgaccggccccgcctggcgatggtcatctccatcgtgatc
gtcctggcgggcctgctggccctcacccgcatacccgtcgcgcagttccccgacatcgtg
ccgccccaggtcagcgtcacgacgctctatcccggcgccaacgccgagacggtggaggcg
acgatcgcccagccgatcgagagccaggtgaacggcgtccaggacatgatctacatgagt
tcgaccagcggtaacgacggcagctacacgctgaccgtcaccttcgccgtcggcacggac
ccggacatcaacacggtcaatgtccagaaccgggtgcgcctggccgaggcgtcgctgccc
gaagaggtcgcgcgccagggcgtccaggtgcgccagcagtcctccgccttcctccagctg
atcagcctggtgtcggaatcgcccgagtatgacgagctgttcctgaacaactacgcccgg
atcaacctgctggacgagatctcccgcgtgtccggcgtgggcgaggcgcggctgttcagc
gagtatgactacagcatgcgggtctggctggagaccgaccgcctgaccagcttcggcctg
tcgcccaatgacgtggtcgccgcgatccggtcccagaacgtccaggccgcggtcggacag
ctcggcgcccagccgcagccgagcgggcagcaactggagttctcgctccaggcggcgggc
cggctcaccgaggtcgcgcaattcgagaacatcgtcctccgggccgacgcggacggatcg
ctgctgcggctcagcgacgtggcgcgggtcgagctggccgcccggtcctactcctccgcc
ggcacgtccaacggccggccggcggccgtgctgggcatctatcaggcgccgggggccaat
gccgtcaccaccgcccaggaggtgctgcgggtgctggaccggctggaggagcgcttcccc
gagggcgtccactacgaggtgacctacgacacgacagtgttcgtgaccgcctccatcgag
gaagtggtcaccacgctggtcgaggccttcgtgctggtcctggtggtcgtcttcgtgttc
ctggggaactggcgggcgacgatcatcccgatgctggcggtgccggtggccctgatcggc
accttcgcgttcctgctgatgttcggccagtcggccaacacgatctccctgttcgccatg
gtgctggcgatcggcatcgtggtggacgacgcgatcgtggtggtggagaacgtcgagcgc
gtgatgcgcgacgagaacctgccggcgccggaggcgacccgcaaggcgatgggccagatc
accccggcgatcatcgcgatcacgctggtcctgctgtccgtcttcatccccgtaggcttc
atccccggcatcaccggctcgctctacgcccagttcgcgctgaccgtctcggtcgcgatg
ctcctgtcggcgatcaacgccctgaccctcagccccgcgctctgcgcgctgctgctgaag
ccccacgagaagcacgggcggatcatgggctggatccaggatcgcatcgacaatgtccgg
aacggctattcccgcctggtcaaccggctggtgcgaatggcgatcctgtcgctggtcgtg
gtcgcggcggcgttcggcggctatttcggcctctccgccatcgtgcccgcgggtttcctg
ccggacgaggatcagggcgccctgttcatggaactgcggctgccgcagaacgcggcgcta
aaccgcacgcaggtcgtggtgcgcgacgtggaaggccttgtccgcgacatccccggcgtg
cgcagcgtcaccgcagtggcgggcttcagcctgctcgacagcctccaggccggcaacgcc
gccttcatggtggtgctgctcgacccgttcgaggagcggaccgaggcggggaccaccgcc
ttcgacgtgctggcccagatccggcagcgcacggcgaccgtgcccaacgcccagatcctg
gccttcaacctgccgccgatctcgggcctcggcaacaccgcagggttcgacttccggctc
caggacctgaccggcggcgagccggcccagctcgcggcggccgccggcgggctggtggtc
gcggccaaccaggatcccgccctggctcaggtcttcacgacgtaccgggtggacacccgg
cgcctgttcgtcgaggtcgaccgggaaaaggcgcaggcgcttggggtccaggtcagcgac
gtctacaacgcgctccagaccacgctgggcggcttctacgtcaacgacttcaaccggttc
ggccgcacctggcaggtcaacgtccaggccgaggcaaaggaccgcgaccaggtggaagac
ctctggcgcatccatgtccggagcgccgacggggccatggtgccgctccgcagcctcgcc
tcggtccggttccagctgggtccgcaggcgatcaaccgttacaacaactaccgcagcgtc
gccatccagggatcgccggcgccgggatacagctccggcggcgcgctgtccgccatggcg
tcggtcgcggaccgcaccctgcctccgggcttctccttcgcctggtcgggcatctcgctc
caggagcaggaagcggcgggacagacgcccatcatcctggctttggccgtcctgttcgcc
tacctgttcctggtggccctgtacgagagctggacgatcccgatcgcggtcctcctctcg
gtctcggtcggcttgtgcggcgccatgctggcgctgatggcgacggggctggcgaacgac
gtctatgcccagatcggcatcgtggtgctgatcgcgctcgccagcaagaacgcgatcctg
atcgtcgagttcgccaaggagcagcgcgaggccggcgcctcgatccgggacgccgcccgg
gaaggggcgcggctccgcttccgggcggtgatcatgaccagcctcgcgttcatcttcggc
ctgatcccgctcgtgacggccgtcggcgccgcggcggcgagccggcgcggcgtctccacg
gcggtgttcggcggcatgatcgcggcatcgagccttggcctgttcgtcatacccatgctc
tacgtcgtgatccagagcatgcgggaatggacgacccgccgcgtccgcggccagccccgc
cggccggagtcccccgccccggcggagtga
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integrated database retrieval system
