Skermanella rosea: JL101_007240
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Entry
JL101_007240 CDS
T07666
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sroe
Skermanella rosea
Pathway
sroe00521
Streptomycin biosynthesis
sroe00523
Polyketide sugar unit biosynthesis
sroe00541
O-Antigen nucleotide sugar biosynthesis
sroe01100
Metabolic pathways
sroe01110
Biosynthesis of secondary metabolites
sroe01250
Biosynthesis of nucleotide sugars
Module
sroe_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
JL101_007240 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JL101_007240 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JL101_007240 (rfbC)
Enzymes [BR:
sroe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JL101_007240 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UEM05222
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Position
1558954..1559505
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AA seq
183 aa
AA seq
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MEIVETEIPDVKLLTPRKFGDHRGFFVETYNRKALEGIGFTKEFVQDNHSLSVPVGTVRG
LHFQLEPYAQDKLVRVIRGAILDVAVDLRRDSPTFGRHVKARLDAESGRQILVPTGFAHG
FVTLEPDTEVIYKVTNYYAPSHDRGLLWNDPDLGIDWPVAGDQAVLSDKDKVQPRLRDLK
DAF
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgttgaaaccgaaatccccgacgtcaagctgctgactccccgcaagttcggc
gatcaccgcggcttcttcgtcgaaacctacaaccggaaagccttggagggcatcggtttc
acgaaggaattcgtgcaggacaatcactccctgtcggttcccgtgggtaccgtccgcggc
ctccacttccagctcgagccctatgcgcaggacaagctggtccgcgtgatcaggggagcg
atcctggacgtcgcggtcgacctgcggcgcgattcgccgacgttcggccggcacgtcaag
gcccgcctcgatgccgagtccggccggcagatcctggttcccacgggcttcgcccatggg
ttcgtgactctggagcccgatacggaggtcatttacaaggtgaccaactattacgctccc
agtcacgaccgcggcctcctgtggaacgacccggacctgggaatcgattggccggtggcc
ggcgaccaggccgtgttgtctgacaaggacaaagtccagccgcgcctgcgcgacctgaag
gatgccttctga
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