Spiribacter roseus: BBH56_01055
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Entry
BBH56_01055 CDS
T06143
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sros
Spiribacter roseus
Brite
KEGG Orthology (KO) [BR:
sros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sros03400
]
BBH56_01055
Enzymes [BR:
sros01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BBH56_01055
DNA repair and recombination proteins [BR:
sros03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BBH56_01055
Prokaryotic type
BBH56_01055
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AUB77838
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All DBs
Position
206578..208134
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AA seq
518 aa
AA seq
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MSAQLVWYKRDLRTADHAPLARAMAEGPVLPVYVIEPDYWRQPDTAQRHWAFIRESLIEL
DAALAERGLRLWVFEGEAMVIFRWLNAALGGITLHAHEETGNAWTHQRDRAVRRGCREAG
IALHEVPQFGVVRPLASRDEWAGHWERRMKAPPVCPPATARALDPGAAVHAAAIPIDRLP
AERGWGRIDCPGRQPGGRAAGESLLASFLATRGETYRQGMASPVSAGEVCSRLSPHIAYG
TLSLREIVQTHRRRWMALKAEAPRSHWARSLKSFESRLHWHCHFIQKLEDEPALEWRNMH
RGYDGLRDESQTDPERLAAWIEGRTGLPFVDACMRQLRAEGWINFRMRAMLVAVSSYHLW
MHWREPAQALARLFTDYEPGIHYCQFQMQSGTTGINTLRIYNPVKQSRDQDPDGAYIRHW
LPALAAVPGEWIHEPWRMPGGLQRRYGVRLGRDYPWPVVDHEQAARDARARIKAHREQRD
LARESARVRRQHASRSPAPERPRSGRRRPPPGQGTLDL
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcagcttgtctggtacaagcgcgatctgcgcaccgccgaccatgcgccgctg
gcacgcgccatggccgaagggccggtgctgccggtgtatgtcattgagcccgactactgg
cgccagccggacaccgctcagcgccactgggcgttcatccgcgagagcctgatcgaactg
gatgcggccctcgccgagcggggcctgcgcctgtgggtgttcgagggcgaggccatggtg
atctttcggtggctgaatgccgcgctgggcgggatcaccctccacgcccacgaggagacg
ggcaacgcctggacccatcagcgtgaccgggcggtgcgacgcggctgccgcgaggccggt
atcgccctgcatgaggtgccgcagttcggcgtcgtccgcccgctggcgagccgcgatgaa
tgggccggacactgggagcggcggatgaaggccccgcccgtgtgcccgccggcgaccgcc
cgggcgcttgacccgggcgcggcggtgcacgccgccgccatccccatcgatcggctgccg
gccgagcgcggctgggggcggattgactgcccgggccgtcagccgggcggtcgggccgct
ggcgagtccctgctggccagctttctggccacccgcggcgagacctaccgccagggcatg
gcaagcccggtgtccgccggcgaggtctgctcgcggctctcgccgcatatcgcctacggg
acgctttcgctgcgcgagatcgtgcagacccatcgccgccgctggatggcactgaaggcc
gaggcgccgcgctcgcactgggcgcggtcgctcaagtcgttcgagtcgcgcctgcactgg
cactgccatttcatccagaaactcgaggacgagccggcgcttgagtggcgcaacatgcac
cgcggctacgacgggctgcgggacgagtcgcagaccgatcccgagcgcctcgccgcctgg
atcgagggccgcaccggtctgcccttcgtcgatgcctgcatgcgccagctgcgggccgag
ggctggatcaacttccggatgcgcgccatgctcgtcgccgtatcgagctatcacctgtgg
atgcactggcgtgaaccggcacaggcgctggcgcggctttttaccgactacgagccgggc
atccactactgccagttccagatgcagtccggcaccacggggatcaacaccctgcgcatc
tacaacccggtcaagcagtcccgcgatcaggatccggacggcgcctatatccgccactgg
ctgccggcgctggccgccgtgcccggcgagtggattcacgagccctggcggatgcccggc
gggctgcagcggcgctacggtgtgcgtctggggcgggattacccctggccggtggtggat
cacgagcaggccgcgcgggacgcccgggcgcgcatcaaggcccaccgcgagcagcgggat
ctggcccgggaatcggcccgagtgcgccgccagcacgccagccgcagccccgcccccgag
cggccgcgctccggccggcgccgcccgccgccggggcagggcacgctggatctctag
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