Spiribacter roseus: BBH56_06115
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Entry
BBH56_06115 CDS
T06143
Name
(GenBank) ATP-dependent DNA ligase
Organism
sros
Spiribacter roseus
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
AUB78713
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Position
1260028..1261617
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AA seq
529 aa
AA seq
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MQGFAELFRALDEQRGTNAKVAAMADYFSRVSAADGAWAVYFLSGRRLKRLIGPVQLREW
LAQMTGLPAWLVDETHQHVGDLAETVALMLDTPVDGDAAPDPGLAHWVETRIQSLRDCDD
GQRRAAVTAAWRELDEAERFLHTKLLTGALRVGVSQTLVERALARASGLPRPVIAHRMMG
QWRPEPAFFEGLFDARSGEEDASRPYPFFLAHPLEGDPADALGAIDAWQLEWKWDGIRAQ
LVRRADAVYLWSRGEALVTDTFPELIEAARAMPADTVLDGEILAWRDQVLPFAQLQRRLG
RKRVTRRFMNEVPVRLMAYDLLESAGRDRRDDPLQSRRARLEALLEDAEPPLMLSPLIDA
PDWATLAARRDESRDRGVEGIMLKGRHTAYATGRPRGPWWKWKISPLTLDVILLYAQPGH
GRRANLYTDYSFAVPDGDQLVPIAKAYSGLDDAEIRRLDRWIRRNTRERFGPVRSVEPVQ
VFELAFEGISPSSRHKSGLALRFPRISRWREDLGPGDADTLDQARALLP
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggttcgccgaactgttccgcgccctcgacgagcagcgcggcaccaacgccaag
gtcgcggccatggcggactatttcagccgggtatccgccgcggacggcgcctgggcggtg
tactttctcagcggacgacgcctgaaacgcctcatcggccccgtgcagctgcgcgaatgg
ctggcgcagatgaccggtctgccggcctggctggtcgacgagacccatcagcatgtcggt
gatctcgccgagacggtcgcactcatgctcgacaccccggtggacggcgacgcggcgccc
gatccggggcttgcccactgggtcgaaacacgcatccagtccctgcgcgactgcgacgac
gggcagcgtcgcgcggcggtaacggcggcctggcgcgagctcgacgaagcggagcgcttt
ctgcataccaaactgctcaccggggccctgcgcgttggcgtatcgcagacacttgtcgag
cgggcactggcccgggcgagcggcttgccccgtccggtgattgcccaccgcatgatgggt
cagtggcgccccgagccagcttttttcgagggactgttcgatgcccggtccggcgaggaa
gatgcctcgcgcccctacccgttctttctcgcccatccgctggagggcgaccccgcggac
gccctgggcgcgatcgatgcctggcagctcgagtggaagtgggacggcatccgggcgcag
ctcgtgcgccgcgccgatgcggtgtacctgtggtcgcgcggcgaagcactggtcaccgat
acctttccggaactgatcgaagccgcccgggcaatgcccgcggataccgtccttgatggc
gagatccttgcctggcgcgatcaggtcctgccgttcgcacagctgcagcgacgactgggt
cgcaagcgcgtgacgcggcgcttcatgaacgaggtgccggtgcgactgatggcctacgat
ctgctcgaatccgctggcagggatcggcgggacgatccgctgcaatcccgccgggcccgg
ctcgaggccctgctcgaggacgccgagccgccgctgatgctctcgccactgatcgatgca
ccggactgggccacgctggccgcacgtcgcgacgaatcccgcgaccggggcgtcgagggg
atcatgctcaagggccgtcacacggcctacgccaccgggcggccacgcgggccgtggtgg
aagtggaagatcagcccgctgacgctcgacgtcatcctgctctacgcccagcccggtcat
ggccgacgcgccaacctgtacaccgactacagcttcgccgtgcccgacggtgaccagctg
gtgccaatcgccaaggcctattcgggcctcgacgatgccgaaatccgccggctggatcga
tggatccggcgcaatacccgcgagcgattcggtccggtccgctcggtggagccggtccag
gtgttcgagctggcattcgagggcatcagcccgtcgtcacgccacaaatccgggcttgcc
ctgcgctttccacgcatcagccgctggcgcgaggatctgggccccggtgatgccgatacc
ctcgatcaggcccgggcattgctgccatga
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