Streptococcus ruminantium: SR187_2830
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Entry
SR187_2830 CDS
T05916
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
srq
Streptococcus ruminantium
Pathway
srq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SR187_2830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srq03400
]
SR187_2830
Enzymes [BR:
srq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SR187_2830
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SR187_2830
DNA repair and recombination proteins [BR:
srq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SR187_2830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
OrfB_Zn_ribbon
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
BBA92175
UniProt:
A0A2Z5TP38
LinkDB
All DBs
Position
544997..545824
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AA seq
275 aa
AA seq
DB search
MPELPEVETVRRGLNRLVKGKTIQKVEVIYAPMVKTGVDRFCQDLVGQVIIDVQRRGKYL
LIYLTDFVLISHLRMEGKYNFFQKQVPINKHFHAFFTFTDDSTLVYQDVRKFGTMELLQE
KNLSAYFASRKIGPEPTEEDFHLAEFTAKLARSKKSIKSHLLDQSLVAGLGNIYADEVLF
RAQVHPAQVSHSLSANQITALRQATIEVLQLGIEKGGSTIRTYKNALGMDGSMQDYLQVY
GKTGQACPCCQEKIVKIQLGGRGTHFCPRCQVLDG
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgaacttcctgaagttgagacagttcgtcgaggtttgaatagattggttaagggg
aagactatccaaaaagttgaggtcatttatgctcccatggtgaaaacaggagtagatcgt
ttttgtcaagatttggttggtcaggtgattatagatgtgcagcgtcgcggcaaatatctt
ttgatttatctgacagactttgtattgatttctcacttgcgtatggaaggcaagtataat
ttctttcaaaaacaggtgccgataaacaagcactttcatgctttttttacttttactgat
gattctactttggtctatcaggatgtccgtaagtttggtaccatggaattattacaggaa
aagaatttatctgcttatttcgctagtcgaaaaatcggtcctgaaccaacagaagaagat
tttcatttagcagaatttactgcaaaattagccagatccaaaaagtctatcaagtctcat
ctcttggaccagtccttggtagcaggcttgggaaatatttatgctgatgaggttttattc
agagcgcaagttcatcctgctcaagtcagtcacagtctatcagcaaatcagataactgct
cttcgccaggctactattgaggtattgcaactggggattgaaaaaggtggatcaacgatc
cgaacttataagaatgccttggggatggatggaagtatgcaggattatttacaagtatat
ggaaagacaggacaggcttgtccttgctgccaagagaagatcgttaaaatccagttgggc
ggtcggggtacgcatttctgtcctcggtgtcaggtgttagatggttag
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