Serratia sp. AS12: SerAS12_0090
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Entry
SerAS12_0090 CDS
T01502
Name
(GenBank) Carbohydrate-selective porin OprB
KO
K07267
porin
Organism
srs
Serratia sp. AS12
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srs02000
]
SerAS12_0090
Transporters [BR:
srs02000
]
Other transporters
Pores ion channels [TC:
1
]
SerAS12_0090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
AEF48204
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All DBs
Position
98712..100106
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AA seq
464 aa
AA seq
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MKYPLPHTGTLAALLLFCSSVQAETLQTGKDVEAPTAKWDGVALGFEPPSPGLLGDMLGI
RPILEDQGFHYNLGYLSQLSYNAGGGYNQDKQASYIDQFSLTFSQDLQALTGIPDAAIEG
NIVNRNHDNNLTRDRLQDPRANPTDLSQESYGGQSITRLGWLTFSRSFLDRRLQWRVGMM
NKVQDFDQIIPCDFQTLALCGGKSANSLTWYNWNVHYWGTTLQYKLTDGLTFKTGVMEQN
PNATSRGHAWSTTTKGSKGFLLPMELELKTNAVNQLPGVYNIGVLFTNARQQDLYEGVSG
GAGATDPNGYRSHNRTWFLYSGFNQQVTRHRDDASRGLSLFYSLGLADQRTNYMHYSTST
GIRYHGLFDARPDDWLGLGVSMVKLSDHYRDNQRYMNQINNVTDYQDPNYRPVPGHSVTA
ELFYRFNVTPWLQLQPGLQYWHHPAGVSETQDAWVTALKTVVTF
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatccattacctcacaccgggacactcgcggcactgctgctgttttgcagtagc
gtgcaggcggaaacgctgcaaaccggcaaagacgtcgaagcgccaaccgccaaatgggat
ggcgtggcgctcggtttcgaaccgccttcgccagggttgctgggcgatatgctggggatc
agaccgatcctcgaagatcagggttttcactataacctcggctatctcagccagctgtcg
tataacgccggcggcgggtataaccaggataagcaggcttcgtatatcgatcagttctcg
ttgaccttcagtcaggatttgcaggcgctgaccggcatcccggacgcggccattgagggc
aatatcgttaaccgcaaccacgacaataacctgacgcgcgatcgtttgcaggatccgcgc
gccaatccgactgatctgtcgcaggaaagttatggcggccagtcgatcacccggctgggc
tggctgaccttcagccgcagttttctcgatcgccggctgcagtggcgcgtcggcatgatg
aacaaggtgcaggatttcgatcagatcattccctgcgatttccagacgctggcgctgtgc
ggcggcaagtccgccaactcgctgacctggtataactggaacgtgcactactggggtacc
accctgcagtacaaactgaccgacgggctgacgttcaaaaccggcgtgatggagcagaac
ccgaacgccacgagccgcggccatgcctggagcaccaccaccaagggcagcaagggcttt
ttactgccgatggaactggagctgaaaaccaatgcggtcaatcagttgccgggggtgtac
aacattggtgtcctgttcaccaacgccaggcagcaggatctgtatgaaggggtttccggt
ggcgcgggcgcgaccgatccgaacgggtatcgtagccacaaccgcacctggttcctgtac
agcggttttaaccagcaggtgacgcgccaccgtgatgacgccagccgggggttgagcctg
ttctacagcctggggctggcggatcagcgcaccaactatatgcactattccacctcgacc
ggcattcgctaccacggcttgttcgacgcgcggccggacgactggctggggctgggggtg
tctatggtcaagctgagcgatcattaccgggataatcaacgttatatgaatcaaatcaac
aacgttaccgattatcaggatcccaactatcgcccggtgccggggcattcggtgacggcg
gagctgttctatcgcttcaacgtcaccccttggttacagttgcagccgggtctgcaatat
tggcatcacccggcgggcgtcagcgaaacgcaagacgcctgggtgacggcgttgaaaacg
gtggtcacgttctga
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