Serratia sp. AS12: SerAS12_3200
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Entry
SerAS12_3200 CDS
T01502
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
srs
Serratia sp. AS12
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srs03000
]
SerAS12_3200
Transcription factors [BR:
srs03000
]
Prokaryotic type
Helix-turn-helix
Other families
SerAS12_3200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
HTH_23
PAS_4
AAA_5
AAA_16
HTH_28
HTH_50
HTH_7
Mg_chelatase
HTH_30
AAA
Sigma70_r4
Sigma70_r4_2
AAA_2
HTH_29
LZ_Tnp_IS481
AAA_22
HTH_AsnC-type
HTH_22
Motif
Other DBs
NCBI-ProteinID:
AEF51267
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Position
complement(3400696..3402639)
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AA seq
647 aa
AA seq
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MNQSQREHIATVMASLSNKAHLLAPRFHEQTIRDSWQRCVEHHGLDPSRMQEARILPWHE
LREHRQEMEEFRHIAHHGLTVLYQQIAAAGYVVLLTDARGITVDYLGDVNAEISLRRAGL
FLGAQWTEACAGTCAVGTALATGKALTVHQADHFDATHIPLTCTAVPLFDPQGQLNAILD
ISALSSPQPKSSQQLALQLAKIYAHQIENAWFEHRHRGDWVLKLSPASSFVEVSPDFLIA
FDAAGKVVGHNHRAQRMLENELGIAAPPVHCRSTLLGRPIEQLFNTSIDSLPDWLASASG
QQGTLERVRSGEKLYVTAVQPVRRAPRKAAVSHGALPPALAALNGGDAALQLQLQRAARL
LEAPLHLMVHGETGCGKEFFAKAFHQASNRRHRAFVAVNCAAIPAALIESELFGHLPGSF
SGAGSKGRRGLIQEADGGTLFLDEIGDMPLEMQTRLLRVLAEQEVLPVGATRPVSVDIRV
ISASHHALDQLVQEGRFRADLFYRLQGARISLPALRQRSDLDWLVDKLLAGKAQLTAAAR
RRLHQHRWPGNLRELSNALDYAAALCEGGRIEVTDLPEGVTAAIPANPLPVVNAEADAAL
PPEARLLVQYLRAARWNHSAVARQMGISRMTLYRRMQRFGIQSPVHD
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcagagccagcgcgaacacattgccacggtaatggccagcctcagcaacaaggcg
catttgctggccccgcgtttccatgaacagactattcgcgattcctggcagcgctgcgtg
gaacatcatggtctcgatcccagccgcatgcaggaagcgcgtatcttgccgtggcatgaa
ctgcgggaacaccgccaggaaatggaagagtttcgccacattgcccatcacggcctgacg
gtgttgtatcagcagattgccgccgccggctacgtggtgctgttgaccgatgcgcgcggt
atcaccgtggattacctgggggacgtcaatgccgaaatcagcctgcgtcgtgccgggctg
ttcctcggggcgcagtggacggaagcctgcgcaggcacctgcgccgtgggcaccgcgctg
gccaccggcaaggcgctgaccgtgcatcaggccgatcatttcgacgccacccatatcccg
ctgacctgcaccgccgttcccctgttcgatccgcagggccagttaaacgccattcttgat
atttccgcgctcagctcgccgcaaccaaaatccagccagcagttggcgttacagctcgct
aaaatttatgcgcatcagattgaaaatgcctggtttgagcataggcatcgcggcgattgg
gtgctgaaactcagcccggcatcgtcgtttgttgaggtcagcccggatttcctgatcgcc
tttgatgccgccggcaaagtggtggggcataaccaccgcgcccagcgcatgctggaaaac
gagctgggcatcgccgcgccgccggtgcactgccgcagcacgctgctcggccggccgatt
gaacaactgtttaatacttccatcgatagtcttcccgattggctggccagcgccagtggg
cagcaggggacgctcgaacgcgtccgcagcggggagaaactgtacgttaccgccgtgcag
cccgttcggcgtgcgccacgtaaggccgcagtcagccacggcgcgttacctccggcgctg
gccgcactgaacggcggcgacgctgcgttgcagctccagctccagcgcgccgcccggctg
ctggaggcaccgctgcacctgatggttcacggtgaaaccggctgcgggaaagagtttttt
gccaaagcctttcaccaggcaagcaaccgccgccatcgggcatttgtggcggtgaactgc
gcggcgatcccggcggcgctgattgagagcgaactgttcggccatctgcccggcagtttt
tctggcgcaggcagcaaagggcggcgcgggttgatccaggaagccgacggcggcacgctg
ttccttgatgagataggcgacatgccgctggagatgcagacccggttgctgcgggtgttg
gcggagcaggaggtgctgccggtgggggccacgcgtccggtatcggtggatatccgcgtg
atctccgcgtcgcaccacgcgctggatcaactggtgcaggaagggcgttttcgtgccgat
ctgttctaccgtttacagggggcgcgtatctcgctgcctgcgttacgtcagcgcagcgat
ctcgactggctggtggataaactgctggccggtaaggcgcagctcaccgccgcagcgcgt
cgccgcctgcatcagcatcgctggccgggcaacctgcgtgaactgagcaatgcgctggat
tacgccgccgcactctgcgaggggggccgcatcgaggtcaccgatctgccggaaggggtg
acggcggcgatccccgccaacccgctgccggtggttaacgccgaagccgatgcggcactg
ccgccggaggcacggctgttggtccagtatctgcgtgccgcccgctggaaccacagcgcc
gttgctcggcaaatgggcatcagccggatgacgctctatcgccgtatgcagcgctttggc
attcagtcgccggtgcatgactaa
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